| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0488 |
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| Symbol | |
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| ID | 5052980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 477109 |
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| End bp | 478278 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470641 |
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| Product | methyltransferase small |
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| Protein accession | YP_001155272 |
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| Protein GI | 145588675 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2890] Methylase of polypeptide chain release factors |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.212986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATATTC AATGGAATCA GGGTGAGTTA AGTCATTCTG CAAAATGGCA CTCAGAGAAT
GGAATTCGCC CCCATCAAAA AGTGATTGCT GCTGATGACA CGCTAACGGC CGATGTTGCC
TATCGCTTAG CGTGCGAAGG AACGGCGATG TTATGGACTG GTGATTTTCA GAATGCCAAA
CAGTTATTGC AAGCTTTAAT TAGAAGAGTT GATAAGCCTT CTAAAAAATC ACAGCGTATT
GATAGGCTCG AGAAAGAAAA ATCTAAATCC CCTGTAGATA TTTTTAATCT ACACCGCCTT
TCTCAGTCGC AGCGTGCCCG TATTTTGGGT ATGGTTTTGA TCCCAATCAA CGCTGACCAT
AGCATCTCGC TTCGCCGAGC ACCTGAGCTT ACACAAGCCT GCATGGAAGC CTACGGAGCG
CAACAAGAGG CTTATGTTGT TTCATTGCGA GAGTTACTCG GTGTTATTAG TGCTCACGAA
TGGCGCAAGA AAGGCGTACC TATTTTAGTT AGGGATGATG AAGAGATTCG AATTCATCCC
CATTACGGCG TCTTCTCTCC CATTCGAGGG GAATATATCG AATTGCTTCT CAAGGCGCCA
CTACCTAAGG CCATACAAAA ATCATCTATC GCGTTTGATA TCGGAGTTGG TACCGGGGTA
TTGTCCGTAG TTTTGGCAGT TCGTGAGGTA AAGAAAATTA TCGCTACCGA CCAAGATGAT
CGAGCTATTG CGTGTGCCCA AGAAAATATT GAGCGTCTAG GATTAGAGTC GCAGATCGTA
GTTCTCAAAA CCAATTTATT TCCTGATGAC AAAGCTGCTC TGATTGTTTG TAACCCACCT
TGGCTGCCAG CGAGACCGAG TTCTACTTTA GAGTATGCCG TTTATGATCC AGAAAGCCAA
ATGTTGAAGG GTTTTCTGCA GGGCTTAAAA GACCATTTGC TGCCGGGTGG GGAGGGTTGG
TTAATTCTTT CGGATCTAGC AGAGCATTTG GGATTAAGAA CTCGCGAAGA GTTACGGGAC
TGGATTGATC AGGCGGGCCT CCAGGTGCTT GATCGTATGA ATACCAAGCC TAGCCATCGC
AAGGCATTTG ATCCTACTGA TGCGCTGTAT AAGGCCAGAT CTGCTGAACT TACTTCGCTG
TGGCGTTTGG CACCTAAAAC TTCGCTTTAA
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| Protein sequence | MNIQWNQGEL SHSAKWHSEN GIRPHQKVIA ADDTLTADVA YRLACEGTAM LWTGDFQNAK
QLLQALIRRV DKPSKKSQRI DRLEKEKSKS PVDIFNLHRL SQSQRARILG MVLIPINADH
SISLRRAPEL TQACMEAYGA QQEAYVVSLR ELLGVISAHE WRKKGVPILV RDDEEIRIHP
HYGVFSPIRG EYIELLLKAP LPKAIQKSSI AFDIGVGTGV LSVVLAVREV KKIIATDQDD
RAIACAQENI ERLGLESQIV VLKTNLFPDD KAALIVCNPP WLPARPSSTL EYAVYDPESQ
MLKGFLQGLK DHLLPGGEGW LILSDLAEHL GLRTREELRD WIDQAGLQVL DRMNTKPSHR
KAFDPTDALY KARSAELTSL WRLAPKTSL
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