Gene Pnuc_0372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0372 
Symbol 
ID5052222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp367488 
End bp368042 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content43% 
IMG OID640470523 
Productisochorismatase hydrolase 
Protein accessionYP_001155156 
Protein GI145588559 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAATC AAGCTACTAG CGCTCTGATC TTGGTGGATT ACCAGACACG ACTCTTACCA 
AGTATTCATG GAGGGGAAGC TGCCGTAAAG GCGGCCCTCA TGTTGGCGCA GGCCGCCGCC
TTAATGGAGG TTCCCGTCAT TGGAACTGAG CAAAATCCAG AAGGGCTCGG TCCAAATGAT
GAGCGGATTC GCAATTGCTG TAATGAAACT GTATTGAAAT ATTCGTTTAA TGGAGTGGAA
GATGGATTGG TGGCGTCTAT TCAAAAAATC AATTCCTCGA TTAATCAGAC TGTACTTGCC
GGTTGCGAAA CCCATGTATG CCTGATGCAA ACCGCATTGG GTTTAAAGGC GAAGGGATTT
GATGTGGCTG TAGTGGCCGA GGCTTGTGGT AGTAGGTCGC CAAACGATAA ACAACTGGCC
ATTGAGCGTA TGCGAGATCA AGGAATTACA ATTCTTGGTA TAGAAATGAT TATTTTTGAA
TGGTTAACGA CTTTGAATCA CCCTCAATTT AAAAATATTT TGCAGCTAAT TAAAAATAGA
GAAGTAAAAA ATTAA
 
Protein sequence
MFNQATSALI LVDYQTRLLP SIHGGEAAVK AALMLAQAAA LMEVPVIGTE QNPEGLGPND 
ERIRNCCNET VLKYSFNGVE DGLVASIQKI NSSINQTVLA GCETHVCLMQ TALGLKAKGF
DVAVVAEACG SRSPNDKQLA IERMRDQGIT ILGIEMIIFE WLTTLNHPQF KNILQLIKNR
EVKN