| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0356 |
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| Symbol | |
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| ID | 5052574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 351239 |
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| End bp | 352117 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640470507 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001155140 |
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| Protein GI | 145588543 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATGC TTGCACAAAT CCTATCGAGC GGTATTGCGG TAGGGATGAT CTATGCGGTT
ATCGCATTCG GTTTTCAGCT CACATTTGCC ACCTCTGGCA CATTGAACTT CGGTCAGGGT
GAGGCGTTGA TGTTGGGAGC CCTCGTGGGC TTGACTTGCG TTGATACCTT CGGAATGAAC
TATTGGGCAA TGATTCCCAT TGTTTGTATT TTCGGAATGA TTCAAGGTAG CTTTGTAGAG
TTGATTGGTG TTCGTCCTGC AATCAAAATT AAATCTGAGT TTGGTTGGAT TATGTCCACC
ATTGCACTCG GTATTATTTT CAAAAACGTT GCTGAAAATA TTTGGGGTCG TGACGCTTTG
CCATTCCCAT CGCCGTTGCC GATGGAACCA ATGAGTTTCT TGGGCGCGAA TATATTGCCG
ATGGAAATTT TGGTAGTAGT TGGCGCATTG GTCATGATGT TGTTAGTAGA GTTCTTTAAT
CGCAAGACCA TTTACGGCAA AGCGGTTGTT GCTACTTCTA ACGATCGCGA TGCTGCAGGC
TTGATGGGTA TCAATACCAG CTTGGTAATT ACCTTCTCAT ACGCCTTGTC ATCATTGACT
GCAGCCTTTG CTGGCGTATT GATTGCTCCA TTGACCTTAA CTGGTGCAAC GATGGGTGGC
GCTTTAGGTT TGAAAGCTTT TGCAGTGGCA ATTATTGGCG GTTTGTCTAG CGGCCTGGGC
ATTATTGTGG GCGGATTAAT TTTGGGAATT ATTGAAACGG CAACTGGTTT CTATTTCTCC
ACTGGTTACA AAGACGTTCC AGGTTTGATC TTGTTATTGC TCGTATTGGC ATACAAGCCG
TCTGGTCTCT TCGGCAAATC TGCAATTAAG AAAGTTTAA
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| Protein sequence | MDMLAQILSS GIAVGMIYAV IAFGFQLTFA TSGTLNFGQG EALMLGALVG LTCVDTFGMN
YWAMIPIVCI FGMIQGSFVE LIGVRPAIKI KSEFGWIMST IALGIIFKNV AENIWGRDAL
PFPSPLPMEP MSFLGANILP MEILVVVGAL VMMLLVEFFN RKTIYGKAVV ATSNDRDAAG
LMGINTSLVI TFSYALSSLT AAFAGVLIAP LTLTGATMGG ALGLKAFAVA IIGGLSSGLG
IIVGGLILGI IETATGFYFS TGYKDVPGLI LLLLVLAYKP SGLFGKSAIK KV
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