Gene Pnuc_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0288 
Symbol 
ID5052263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp281532 
End bp282581 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content43% 
IMG OID640470440 
Producthypothetical protein 
Protein accessionYP_001155073 
Protein GI145588476 
COG category[S] Function unknown 
COG ID[COG5397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAACT CATTCTATAA GCCACTCTCC CTAACTGCAC AAACTGCTTA TGCGGAGTTA 
CAGGATCAGC TACGTATACA CAATATTGAT CGTCTTAGAG TCTTGCCTGG TGCGTTTCAC 
AAGCAAACTC AAAAAGGGAA GTCTTACATT TACTATGGCT ATCGTGATTT AGATGGTTCT 
GGGCGGATGG CATATGTGGG CCCAGAGGAT CAGCGTGTAA ATGAGTTAAT TCAAAAGCAT 
CAAGCGTTAA AGGGTGATGA GTTAAGTCAA AAGATCAAGG GTTTGGCTAA ATCTGCTGAG 
GCATTGGGTT GTGCTAGCAC CTTAACTAAG CATTTTAGAG TGGTTAATCG TCTTGATCAG 
TATGGTTTTT TTAGAGCGGG TAGCATTCTA ATTGGAACCC ATGCTTTTCT TGCTATGGGC 
AATATGCTTG GCGTGAAATG GCTTTCATCT AATTTAACAA TGGATGTCGA TTTTGCGCAT 
GCTGGAAAAA ATGTATCGAT TGCACTGGGC GCTAATGTCA AAATTTCAGT ACACGACGCT 
CTCAATTCCC TGGAGATGGG TTTACTTCCT ATTGCAGAAT TTTCGGGTAA GACGGGTGCT 
CAATACCGCA ATCCGAAAGA CCCAGAATTA CGTTTGGATT TTGTGACTCC TCAAACCCGC 
GATGGTGGAC CCGTGATATT GCCAAATTTG GGTTTAACTT TGGAATGCTT AAAGTTTATG 
GAGTATTCCT TAGTGGGTAC AACTCAAACT GTTCTACTTT CGAAAGAGGG CGCCTGTATG 
GTTAATATCC CAGCTCCTGA GCGTTATGCT GTTCACAAAC TGATTATCTA TGGAGAGCGT 
CCATTAAATG AGCACGCTAA AGCAAATAAA GACTTGGGGC AGGCTGCAGC AATTTTTAAA 
GCACTATTTG ATATGGGTAA TGGAGACCTT GTGAGATCTG CGTGGTCAGA TGCCCTATCA 
CGAGGGCCTG GTTGGGTTAA AAGACTGAAT CAGGGGAGGG CTGCTTTACT TAAACGCTAC 
CCGGAATTAT TGGCTTTGGC TAATGAGTAA
 
Protein sequence
MINSFYKPLS LTAQTAYAEL QDQLRIHNID RLRVLPGAFH KQTQKGKSYI YYGYRDLDGS 
GRMAYVGPED QRVNELIQKH QALKGDELSQ KIKGLAKSAE ALGCASTLTK HFRVVNRLDQ 
YGFFRAGSIL IGTHAFLAMG NMLGVKWLSS NLTMDVDFAH AGKNVSIALG ANVKISVHDA 
LNSLEMGLLP IAEFSGKTGA QYRNPKDPEL RLDFVTPQTR DGGPVILPNL GLTLECLKFM 
EYSLVGTTQT VLLSKEGACM VNIPAPERYA VHKLIIYGER PLNEHAKANK DLGQAAAIFK 
ALFDMGNGDL VRSAWSDALS RGPGWVKRLN QGRAALLKRY PELLALANE