Gene Pnuc_0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0247 
Symbol 
ID5053341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp245868 
End bp247199 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content45% 
IMG OID640470399 
Producthypothetical protein 
Protein accessionYP_001155032 
Protein GI145588435 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.103326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAA AAAAATCCTG GTTGATTCTG TCACATGGAT TCAATATGGA TGGCAGGGCG 
TCTAGCCAGA CCATTACTGA CAAGATTCCT TATTTATTAG AAGCTGGTAT TCAGCCGATT 
GTATTTAGCG CAATCACCGG TATTCAGGAT CAACGTTTTC CGCATCGCCG TTTTTTGGCG 
TGGGGCCCAG CAGCATTTAG GTTTGATTTT CGGCACTGGA TTGCTAATCA ATATGGTCGC 
GGTTTTATTT ATAAGCTCCT CACTCGAACC GTTTCCATTG TTCTCGCACC TTTTATCGGC 
TTGGAGAAAC TGATTCTGGG TTACTCCAGT CAGTGGTCCT GGGCGATGCC TGCCTTTATT 
CATGGCTTGG GATTAGTTCG CTCCGGCAAA GTAGATTTAG TTTTTAGTAC TGGCGGCGCT 
TGGTCTGCTC ACTTGGCAGG TCTTTGGTTA AAAAAATGGA CTGGAATTGC TTGGATTGCA 
GAAATTCATG ATCCTTTGGT TATCCGTAAG AATCCAAATG ACCAGGGTTT TGAGCAACCC 
AAAAATCGTG ATGCGCGCTT TCGACATTAT CTAGAGCGGC AGTTAACGAA ATATGCTGAT 
CACGTCTGGT GGTTTACAGA TGGCGCCGTG CATTATGCAA AAGTTCGCAA TCCTAATCTG 
AATACTCCTG AAAATGCCCA TGGTTTTATG GTGTTGCCAG GCGCCGAGCC TCCGGGCGGA 
GTAACTGCAG AAAAGCCTCA TAGATATTCA GAGAAATTAA ATTTGTGTCA TTTTGGCTCT 
TTGGCAAACG ATCGTTCTTT GTCTACCATC TTGAACGCAT TAGTCCCTCT ATTAGAAAAG 
TACCCTGTAG CAAGGGATCA TATTCAAGTA CATGCCTATG GTGCAGCCTT AGATCCCTTG 
ACTATCCAAG CTATCAAAAC TTTGGGATTT AATGATGTGT TATTGGCTCA TGGGCGCTTA 
GAAAAAGACC CCATTACAGG CAAGTCTGGG CGTGAGCAGG TGCTTGAAAA AATGCAAGAA 
GCTGATGTAT TGATTTTGCT GCACGGGAAT GATGAGTGGT GCGCAGAATA TATCCCCTCT 
AAATTCTATG AATACCTCTG GACAGGAAGG CCGATTTGGG GAATCACTCA TCGCAACCCC 
CAGTTGGACC AAATGCTCGA GGAACGGGGC GCTTACCTGA GTCAAGAAGG TGACGCAATA 
GGAATTGCTA CAGCACTCGA GAGAATCTGG TTAGACTGGA AGCAACAAAA ACTGCATCAG 
CCATTAGGAT CGCCAATGGG GGTTGATCAA GCAGTCCGAA AAATTCTCAC TGAAATTCAG 
TGGCAGTCAT AG
 
Protein sequence
MSEKKSWLIL SHGFNMDGRA SSQTITDKIP YLLEAGIQPI VFSAITGIQD QRFPHRRFLA 
WGPAAFRFDF RHWIANQYGR GFIYKLLTRT VSIVLAPFIG LEKLILGYSS QWSWAMPAFI 
HGLGLVRSGK VDLVFSTGGA WSAHLAGLWL KKWTGIAWIA EIHDPLVIRK NPNDQGFEQP 
KNRDARFRHY LERQLTKYAD HVWWFTDGAV HYAKVRNPNL NTPENAHGFM VLPGAEPPGG 
VTAEKPHRYS EKLNLCHFGS LANDRSLSTI LNALVPLLEK YPVARDHIQV HAYGAALDPL 
TIQAIKTLGF NDVLLAHGRL EKDPITGKSG REQVLEKMQE ADVLILLHGN DEWCAEYIPS 
KFYEYLWTGR PIWGITHRNP QLDQMLEERG AYLSQEGDAI GIATALERIW LDWKQQKLHQ 
PLGSPMGVDQ AVRKILTEIQ WQS