| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0185 |
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| Symbol | |
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| ID | 5052482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 181549 |
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| End bp | 182595 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640470337 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001154970 |
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| Protein GI | 145588373 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0857052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCTAA ATAAACAGAG TCAATTAGAC TTTGCTCAGC AACTCTTGGC ACTGTTAAAT
GCAGGCTTAG CCTTACTAAA CGCCATTGAA CTTATTCAGG AATCATCCCA AAAAAGTTGG
CAACCCTGGC TAAAAGGCCT GTTAAGTGAA CTCAAGAAGG GAAATAGCTT TTCTCAAAGT
CTCAAATCCC AGCATAATCA ATTCTCTGTC GAATTTATCA ATCTCATTCG CGTAAGCGAA
CGTACCGGAG ATATTGAACG CGCCCTCAGA ACAATTTGTG CGCAACTGGA ATCCCAAATT
GAGTTGCGAC GCAAAATACA ACAAGCTCTT AGCTACCCTC TCATTACTTT AACTAGCTCA
CTTTTGCTAG TGGTAGTAAT GATGATTTGG GTGGTTCCCG TATTTAAGGA TGTCTTTGCA
CATTTTCAGG CGGAATTGCC ACCCCCAACC AAAGCCCTCA TTCAGGTCTC GAACCTCATC
AATCACTATT TTCTAGAAAT CAGCATTTGC CTAATCAGTA GCTCAATCTT TTTTCTTGTA
GCCTGGAATA GATCATCCAC ACTACAGAAA ATGTGTGACC AATGGAGTTT TCGCATCCCG
CTTATCGGGA AACTACTTCG CCTAGCGACA TTAACGTATT GGTGCCGCAC ATTAGGACAC
TTACTAGAAT CTGGTCTTCC ACTTCCAGAT GCCCTAAGGG TGACTGCCCA ATCATCCAAT
CACTGGCTTA GCCATGACTG CAGTGCAGAG GTATTTAAAC ATCTCACCCA GGGATGGCCT
TTGGGTGAGG CCCTCAAGAG AGGAGATCCA AAAAGCCGTT TGTTTGATCA TGAAACTCTA
CAACTACTCC ATATCGCCTC AGAAAGTGGC TGCCTTTCCC AAATGCTAAA CAAACGCGCC
ATGACCTTAG GCTCACAATT AAGTAATCGT CTGAATAGCC TAAGTCAGAC TTTAGAGCCA
TTATTAATTA TCGTAGTGGG ATTCATTATT GGTAGCCTAG TCATTATTCT GTATCTACCA
ATATTTAATT TAGGGCAGAT TGTTTAA
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| Protein sequence | MALNKQSQLD FAQQLLALLN AGLALLNAIE LIQESSQKSW QPWLKGLLSE LKKGNSFSQS
LKSQHNQFSV EFINLIRVSE RTGDIERALR TICAQLESQI ELRRKIQQAL SYPLITLTSS
LLLVVVMMIW VVPVFKDVFA HFQAELPPPT KALIQVSNLI NHYFLEISIC LISSSIFFLV
AWNRSSTLQK MCDQWSFRIP LIGKLLRLAT LTYWCRTLGH LLESGLPLPD ALRVTAQSSN
HWLSHDCSAE VFKHLTQGWP LGEALKRGDP KSRLFDHETL QLLHIASESG CLSQMLNKRA
MTLGSQLSNR LNSLSQTLEP LLIIVVGFII GSLVIILYLP IFNLGQIV
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