Gene Pnuc_0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0129 
Symbol 
ID5052177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp123474 
End bp123881 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content44% 
IMG OID640470280 
Productstringent starvation protein B 
Protein accessionYP_001154914 
Protein GI145588317 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.04048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGACG TTCCAAGTAA TAAACCATAT CTAATCCGTG CCCTACACCA GTGGTGCACG 
GATTTTGGTT TTACGCCATT TATTGCCGTA TTTGTGGATG CCAGAGTAGA GGTACCAATG
GAATTTGTTA AGAACGATGA AATCGTCCTG AACCTTTCCT TGGATGCTTG TCATCAATTG
CAGATGGAGA ACGACTGGAT TAGCTTTCAG GCAAGATTTG GGGGCATTCC TCGCAAGATT
ATGGTTCCTG TCAGTCACGT GCTTGCAATT TATGCCAGGG AAAATGGCCA GGGAATGTCA
TTCCCCTTTG ACCCATCACA AATGAAAGAT TTGCATATAG CCGATTCTTC TGATGCAGCA
GTCGAAAAGC CTAAAACCAA TAAACCTGGC CTGAGGATTG TGAAATAG
 
Protein sequence
MSDVPSNKPY LIRALHQWCT DFGFTPFIAV FVDARVEVPM EFVKNDEIVL NLSLDACHQL 
QMENDWISFQ ARFGGIPRKI MVPVSHVLAI YARENGQGMS FPFDPSQMKD LHIADSSDAA
VEKPKTNKPG LRIVK