| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0120 |
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| Symbol | |
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| ID | 5051919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 112570 |
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| End bp | 113844 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640470271 |
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| Product | porin |
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| Protein accession | YP_001154905 |
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| Protein GI | 145588308 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.993505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT CGCTATTCGC AGTTGCAGCC TTGTCAGCTA TTGCTGGCTC TGCACAAGCT
CAATCAAGCG TAACCGTTTA TGGCCTGTTG GATTTGGGTT ATGTTGGTTA CAACACACGT
GCAGCTACTG GTTCTACACA AAACCCACAA GCTGTTAACA AAACAACTGG TAACGCTTTC
TCATCATCTG CTGAGTCCAC ATCACGCTTA GGCTTCAAAG GTACTGAAGA TTTAGGCGGC
GGTACTTCTG CGTTCTTCAC TGTTGAACTC GGTCTTACAC CTAACAACAA CCAAGCTGTT
AACACTGGTG GCACACAAAA CCGTCAAACT TTCGTTGGTT TGAAGAAAAA TGGTATTGGT
CAATTTGCTT TGGGTACTCA GTACACTGTT GTTCATAACG CTGTTGCAGC TACTGACCCA
GGTCAAGCTA ACAACATCTC TGGTAACTTG ATTTACCCAG CAACTACTGA AGGTGCTGGT
TCTGCAGAGA ACTCAACTGG TGCAGCTTAC ACAGTTCGTA CAAACAACCA ATTGTCTTTG
AACAGCGATA CATTTGCTGG CTTCAAAGCT AATGCAATGT TAGTTGCTAA CAACAAGAAC
TCAAACGAAA CAATCACTGT TACTGGTACA CCTGCAGCCG GTACTTATGC AGCAGCTGGT
GGCTTGAACA ACCAGAACGG TTGGGGCTTA GGACTTGACT ACACATTCAA GAATTTCTAT
GCAACAGCTA ACTACCAAGC GATGACTTCT AAGCAGTCTG CACAAACTTA CACATACACT
TCACCGTATG TAACAGGAAT TACTGCTGGC GCTCCAGCAC AAGGTTATGC AGGCGGTTCT
TCTGCTAACG GTACAAACGT ACAAGACAAC CAGTGGTACG TTGCTGCTAC TTATGACTTC
GGCATCTTGA AGGCATACGC ACAGTACATT ACACGTAAGG TTTCTGCACA ACAAGACAAC
AGCTATTACT ACAAGCGTTC TGCTGAGCAG ATCGGTGTAC GTAGCTTCAT TACTCCAACT
ATCGAAGCTT GGGTATCTGG TGGTTTGGGA CGTTACAACG GTTACGGTGC TAACACAGCT
AATTTAACAG CATGGCAAAT TGGTTCTAAC TACTGGTTGA GCAAGCGTAC TAACTTGTAC
GCAATCTACG GCCAAGTTGG TACTTCTAAT GCGTCATACC CTACTTCAGT AGCTGGTGGC
GCACAAAATA CCAACCTTAA CCCAGCATCC GCTAATATCA GCAACTACGC TGTTGGCGTA
CGTCACACTT TCTAA
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| Protein sequence | MKKSLFAVAA LSAIAGSAQA QSSVTVYGLL DLGYVGYNTR AATGSTQNPQ AVNKTTGNAF
SSSAESTSRL GFKGTEDLGG GTSAFFTVEL GLTPNNNQAV NTGGTQNRQT FVGLKKNGIG
QFALGTQYTV VHNAVAATDP GQANNISGNL IYPATTEGAG SAENSTGAAY TVRTNNQLSL
NSDTFAGFKA NAMLVANNKN SNETITVTGT PAAGTYAAAG GLNNQNGWGL GLDYTFKNFY
ATANYQAMTS KQSAQTYTYT SPYVTGITAG APAQGYAGGS SANGTNVQDN QWYVAATYDF
GILKAYAQYI TRKVSAQQDN SYYYKRSAEQ IGVRSFITPT IEAWVSGGLG RYNGYGANTA
NLTAWQIGSN YWLSKRTNLY AIYGQVGTSN ASYPTSVAGG AQNTNLNPAS ANISNYAVGV
RHTF
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