| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0103 |
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| Symbol | |
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| ID | 5053086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 99681 |
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| End bp | 100469 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640470255 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001154889 |
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| Protein GI | 145588292 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.759758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACG CGCTAAATAA GCCTACGTTG GAATACGGTA GCGGCTTTCC GACATTGTTA
TATAAAGAAG TAAAACGTTT TTATAAGGTG GCTTTTCAGA CGGTAGCAGC GCCAGTCCTC
ACCGCAATTT TGTATCTCAT GATTTTTGGT CATGTGCTCG AAGGTAAAGA GGTTTACGGG
CGCCTAAGTT ACACCGCCTT TTTAATTCCC GGTCTGGTCA TGATGAGTGT CTTGCAAAAT
GCGTTCGCTA ATACTTCTTC ATCCTTAATT CAATCCAAAA TTACTGGCAA CCTTGTTTTT
GTTCTGCTGG CACCGTTAAG TCATTTTGAG TTCTACGCTG CATATATTCT GGCAGCAGTA
TTCCGCGGTG TAGTTGTTGG CTTGGGTGTA TTCCTCATCA CGGCCTGGTA TGGCTTACCT
GCTATAGAAA ACCCTATTTG GATTTTGACA TTTGCATTTT TAGGGGCCGC AATTTTGGGT
AGTCTAGGTT TGATTGCGGG AATCTGGGCA GATAAATATG ATCAGCTGGC TGCATTTCAG
AATTTCATCA TCATGCCTGC TACGATGCTA TCCGGCGTCT TCTATTCAAT TCACTCATTG
CCACCCGCAT GGCAGGTTGT ATCTCATTTC AACCCCTTCT TTTATATGAT CGACGGATTT
CGATTTGGGT TCTTTGGAGT TTCAGATATA TCCCCATGGA ATAGTTTGGC AATAGTGTTG
TGCTTCTTTG CTGTAGTTTC AGTAATCGCA TTACGATTGC TGCAAAAGGG CTATAAGCTC
AGACATTAA
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| Protein sequence | MKNALNKPTL EYGSGFPTLL YKEVKRFYKV AFQTVAAPVL TAILYLMIFG HVLEGKEVYG
RLSYTAFLIP GLVMMSVLQN AFANTSSSLI QSKITGNLVF VLLAPLSHFE FYAAYILAAV
FRGVVVGLGV FLITAWYGLP AIENPIWILT FAFLGAAILG SLGLIAGIWA DKYDQLAAFQ
NFIIMPATML SGVFYSIHSL PPAWQVVSHF NPFFYMIDGF RFGFFGVSDI SPWNSLAIVL
CFFAVVSVIA LRLLQKGYKL RH
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