Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_2298 |
Symbol | |
ID | 5054090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 2057319 |
End bp | 2057675 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640469850 |
Product | transcriptional regulator, TrmB |
Protein accession | YP_001154494 |
Protein GI | 145592492 |
COG category | [S] Function unknown |
COG ID | [COG2512] Uncharacterized membrane-associated protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00618378 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTAGGGT TGGTGCTTCT AATAGTCCAG CTGTCTGTGT TAGTGGCGGC GGCCTACGCT GGGAGGACAA AGCTGAAAAG ACTATTGGCT GAGGCCCAGA CCACCGGCGA GACTGAGCTA GATGAGCCGC TGGAGGGAGA TATGTCCGAG GTGGACAGGT CGATACTGAG GCTACTCGCC GAGCGGCAGG GGGTTATGTA CCAAAGCGAG ATCGTAAAAG AGCTGGGCCT ACCCAAGAGC ACCGTCCATA AAGCGCTGAG GAGGCTCAGC GAGGGTGGCT TCGTGGAGAT TCAGAAACGG GGCCGCTTAA ACGTGGTTAT CTTGAAAAGA GCTACTTCAG AGGCCTCAGC AACTTAA
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Protein sequence | MLGLVLLIVQ LSVLVAAAYA GRTKLKRLLA EAQTTGETEL DEPLEGDMSE VDRSILRLLA ERQGVMYQSE IVKELGLPKS TVHKALRRLS EGGFVEIQKR GRLNVVILKR ATSEASAT
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