Gene Pars_2190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2190 
Symbol 
ID5055154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1962114 
End bp1963250 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content63% 
IMG OID640469742 
Productamidophosphoribosyltransferase 
Protein accessionYP_001154388 
Protein GI145592386 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCG GCCTCTTAGC CATTTACAGC TTCGCGGGCG AGATCAACCT ATACCCCTTG 
GTGTACTACG GCCTAAGGGC CATGGCGAAT AGGGGCGATG TCGCTGTGGC ATACCTTCTC
GGGCGCAGAG GGCTGGAGAG GCTGGAGGTG GACTTGTCGC GGGAGGAGCC CCGCGACGTG
CGGGGCGTGG CGGCGGTGGG CTGCGTCTAC ACGGAGGACT GCTGCCGCGT TGAGGGGGAC
GTGGCGTACT GCGCCTTCGG GAGGGGGGAG GTGAAGCCGG GAGCGCCGTC AGATGCCGCC
GCCTATGTTG CGCTGACGGC AGACGGCGTC CTCTACGCGT ATCGCCCGCC GAGGCTTTGG
CACCTCGCGG TGGGGGTCCA CGGCTTCGAC TTCGCGCTTA TCGCCACGGA GACAGCCGCC
ATAGAGGTGC TAGGCGGCGA GGTGAGGAGG AGCTTGAGGG GCGGGGAGCT TCTGAAAATA
ACCCGCCTTG GGGTGGTGTC GACAGGAGGC GAACAGCCTG GGGAGGTCTG CGCCATGGAG
TACGTCTACT CGTCGCGGCT AGACAGCGAG ATCGACGGGG TGGAGGTGGC CGAGGTGCGG
GCGAGGCTGG GGGAAGCCCT CGCCGCTAAG GTGAAAAACA GCTTAGATGT CATAGTTGGA
GTTCCGGACA CGGGGCTTTA CTACGCCGCA TGGGTCGCCG AGAAGCTGGG CGTGCGGCAC
GTTCCCGGCT TCGTCTCAAC CGTGCGCAAG AGAAGTGCTC TTCTCGACGA CGTGAGAGAC
CGGGTCTCGG CAATTCAGCT CAAGGCCAAT GTGGTGAAGC ACGCCGCTAG GGGAATGAGA
GTTCTCGTAA TAGACGACAG CCTAATCAGC GGCCTTACCC TGCGCCACAT TGCCCAACTC
CTCCGCCTGA GGGCCGGCGC CAAGGAGGTG CACGCCGCAG TGGCCGCGCC TCCGCTGAGA
TCGCAGTGCC CCTACGGCGT CAAGATGCCG CCTGATAGCC ACATGGTATT CAACCACCTC
GAACAAGACA CGGTCACAAA AGCGCTGGAG CTAGACGGCT TGTACTATTT AACGCTGGAA
GAGTTCCAAA GAGCCATTGG TGTTAGGGTC TGTACGCTTT GTTTTAAGAG GCGCTAG
 
Protein sequence
MSAGLLAIYS FAGEINLYPL VYYGLRAMAN RGDVAVAYLL GRRGLERLEV DLSREEPRDV 
RGVAAVGCVY TEDCCRVEGD VAYCAFGRGE VKPGAPSDAA AYVALTADGV LYAYRPPRLW
HLAVGVHGFD FALIATETAA IEVLGGEVRR SLRGGELLKI TRLGVVSTGG EQPGEVCAME
YVYSSRLDSE IDGVEVAEVR ARLGEALAAK VKNSLDVIVG VPDTGLYYAA WVAEKLGVRH
VPGFVSTVRK RSALLDDVRD RVSAIQLKAN VVKHAARGMR VLVIDDSLIS GLTLRHIAQL
LRLRAGAKEV HAAVAAPPLR SQCPYGVKMP PDSHMVFNHL EQDTVTKALE LDGLYYLTLE
EFQRAIGVRV CTLCFKRR