Gene Pars_2188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2188 
Symbol 
ID5055554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1960046 
End bp1960501 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content56% 
IMG OID640469740 
ProductPaREP1 domain-containing protein 
Protein accessionYP_001154386 
Protein GI145592384 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.881035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGGTGCC GGAAGGAGTC GTCAGAAAAA TTGGAGAGCT TGCAAAAAAG AGGGTGGTAC 
CCTAACTACG TCGAGGCGGA TCCAGATGAT AAGGTGGAAC TTCACCTAAA GCTTTGCGAG
AAGTACCTCC GCGAAGCCGA ACAACTGACA CAAAAAGGCG GATACGTTCA AGCCTCTGAG
AAGGCGTGGG GGGCCGCCGC CCAGATAGTG GACGCAGTGG CGTCTAAGAG AGGCGAAGAG
CTGAAGAGCC ACGGCGATTT GTGGCGCTTC GTCACCAAGC TGAGGGAGAG ACTGGAGATG
CCGAGTTGGC CAGGCTGTGG CACGCGGCTA ACAGCCTACA CACCAACTTC TACGAGGCGT
GGGCCACGCC GGAGCTTGTC AAAGACGCAG TTAAAGACGT CAAGCCTTCG TCGAGAAGTT
GAAACGGCTC ATATGACGTC GCCAGCGTCG ATTTGA
 
Protein sequence
MRCRKESSEK LESLQKRGWY PNYVEADPDD KVELHLKLCE KYLREAEQLT QKGGYVQASE 
KAWGAAAQIV DAVASKRGEE LKSHGDLWRF VTKLRERLEM PSWPGCGTRL TAYTPTSTRR
GPRRSLSKTQ LKTSSLRREV ETAHMTSPAS I