| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2149 |
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| Symbol | |
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| ID | 5056034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | - |
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| Start bp | 1925371 |
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| End bp | 1926969 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640469701 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001154347 |
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| Protein GI | 145592345 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTTGCT CTGTGGTGAA GTGGCGGAGC GACCCCTTCT ACGGCCGCGT GGCGGTCGTC
AAGGCGGGTA ACGGATACGT CGTGGGAGAC TTCACCGGCT GGATACACGG GGCCTTTAAA
GAGGTGGTGG AGCTACCGCC CGGCAGATAC GCCGTTGCCT CCAGCGACGG CGCCGAGGAG
TGCCTAGTAG AGCCGCCGGA GTATCCATGG CACTTCTCCG TGCCCTATAT GGGGGTGGAC
TGGGGGGACG TGGCCGAGAT TAGGATATAC GCCCCGGAGC CCCCCGAGGT AAGCGGGGGC
CGTGTCGTGA AGTTATTGGA GGGGGAGCCC TTTTCAATAT ACGCGGCGGT TATAAAAAGT
AGAAGGTATG AAGTGAGGTG TTGCGGCAAG GTGAAGAGGT ATAGACGGCC TCCTCTAGTT
GAGGGGCATG GCATCTACGC CATGTACGAG GTCCTACCCG ATAGAGCCGC CAATAGAACG
GGGTGTAGGG ATCTTAGGCG CCAGTTCTGC GGCGGGACTT TAAAGGACGT TGCCGAGATT
GCCTTGTCCG CTTCTGAATT TGCAGATGCG CTGTATCTGC ATCCAATATA CCCCGCAATG
AGCTACCACA GATACGACGT GGTGAACCAC TTGGATGTGG ACGAGAGGCT TGGGGGGTGG
GCTGCGTTCG CCGCACTTAA GGACGCACTC AACGGGCGGG GGATGAAGCT TGTTCTTGAC
TTGGTACTAT ACCACGTTGG CCTCCGCAAC CCGCTCTTCC CCAACGGTCC CTTCATCATA
AGAGACCAAT CCTTCACAAC GCTTGTCAAG TCTCTGGCTG ACATTATGCC TAGGAACGCC
TTGACGGGAC TCCTGCTTGG AAAACCCCCG TATGATACGT TTCTAAAAGT TTGGCTTATG
CCTCGGCTAG ACTACTCAGA CCGCCGTGCG GTCCAATACG CGAGGAGCGT TGTGGAGTTC
TGGACGCCTA AAGTCGACGG GTTTAGGCTT GACGTTGCCC ACGGCATGCC CCCATCTGCG
TGGGACGAGA TACTAGAACC GGCGCGGCAT CGGTACATTC TAGGAGAACA TGTGGGCAAC
CCCGCTCCAT TTTACAAGTC AATTAAGGGC TTCACTGCCT ATATCTTATA TGGAGAATTG
GTGAAGTCCG GTTCTTTTTC CACAATTTCG GAGGCGATTA ATAGGTACCT TGCACTGACG
CCGCCGGGCG CCTTGCCTTA TATGAACACG TTTATTGAAA ACCACGACAC TGATAGGGCA
GTCACTACTA TGGGGGGCTT GGTGACTGTG GGATATGCGG TGATATTCAC GCTACCTGGG
GTCCCCTCCG TGTACGCAGG TGGCGAGTGC GGCGTAGGTG GTAGGGCCAG TGACCACACT
AACCGGGCCC CTTATAAGCC ATGTCCCGGG TCTCCCATTG CCGACACGCT CCGTGCGCTG
TACTCGGCGA GAAGAGAGTT TGGCCTATGG CGTGGGCCTG CGTGGGCAGA GCAGAAAAGA
GGGCGTATTA TCATAAACAG GCCGGGCACT AGAGCGGAGA TAGACTTAAA TAAAATTGCC
ATACTCGGCG CGGGGCGACA GCAAGAGATT CCTTTATAA
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| Protein sequence | MACSVVKWRS DPFYGRVAVV KAGNGYVVGD FTGWIHGAFK EVVELPPGRY AVASSDGAEE
CLVEPPEYPW HFSVPYMGVD WGDVAEIRIY APEPPEVSGG RVVKLLEGEP FSIYAAVIKS
RRYEVRCCGK VKRYRRPPLV EGHGIYAMYE VLPDRAANRT GCRDLRRQFC GGTLKDVAEI
ALSASEFADA LYLHPIYPAM SYHRYDVVNH LDVDERLGGW AAFAALKDAL NGRGMKLVLD
LVLYHVGLRN PLFPNGPFII RDQSFTTLVK SLADIMPRNA LTGLLLGKPP YDTFLKVWLM
PRLDYSDRRA VQYARSVVEF WTPKVDGFRL DVAHGMPPSA WDEILEPARH RYILGEHVGN
PAPFYKSIKG FTAYILYGEL VKSGSFSTIS EAINRYLALT PPGALPYMNT FIENHDTDRA
VTTMGGLVTV GYAVIFTLPG VPSVYAGGEC GVGGRASDHT NRAPYKPCPG SPIADTLRAL
YSARREFGLW RGPAWAEQKR GRIIINRPGT RAEIDLNKIA ILGAGRQQEI PL
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