Gene Pars_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2148 
Symbol 
ID5055596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1924208 
End bp1925350 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content53% 
IMG OID640469700 
ProductAAA ATPase 
Protein accessionYP_001154346 
Protein GI145592344 
COG category[T] Signal transduction mechanisms 
COG ID[COG0467] RecA-superfamily ATPases implicated in signal transduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTTG ACTTCCGCGG AGTGACTGCC ATATTTGGAA GGCCTGGGGT GGGGAAAACT 
AGCCTAGCCA TGAGAATTGC CCACGAGAGG CTTTCCAAGG GCGACAGAGT TCTCTGGGTA
TCACTCTACG AGGATCGAGA AGCCCTTATA CAAAACGCCT CGTCTTTAGG CTACGATTTA
TCAAAGGCAG AGATCTGGGA TATGATATTT GTAAAAACAG ATGCAATACT TAACCAAATA
GTCTCGACAG TAAGCCAGAG CGACTACGGT TTGGTGGTTG TAGACTCCAT ATCATCTATT
GTAGAGGGCT CTCAGTCTAG GGAGTATCTA ATAAATGCCG TATACCGCGT CTTCAGGCCG
GCGGGCATCG ACTTTATCGG CATATCGGAG GAGGAGGCGG TAACACCTCT TGACTATATA
GCTGACAACC TAATCCGCCT TGAGATGAAG TTCTTCAACG GCGCCGCTGA GAGGAGGATG
TATGTGCTCA AGGCAAGGGG ACGCCGCGCT GGCTACTACG TCGAATTTGA CATCATAGAG
AAAAGAGGTG TCGTGTTTTT AGACGAACTC CCGAGGCCCC AGACCAAGGG CGGCTGGGAG
AAATACGCGG AGGCCATATC TAGGGCCGTG GGTCCCGTGC GGGGGGGCAA CATATATCTC
TTCGCCGGAT GGGGGCTGAC GCCCCTCTTG GCGAAAACCG CGGCTGATCT CTCCAAGGAC
GGGGCCAAGG TCCTTTACCG CATTTTTGAG CGCGACGCCT CGCTTGTGGC CGCTTTGGTG
GAGAGATTCG GCGGAAGAGC AGAGGTTCAA CGAGTGGAAC CCAAGCCAGT AAACTACCTG
GCTCATGTCG CAGAGTTTTT CGAGGCGCTG ACAAATACAA GCGCCGACGT AGTTATCTCA
GATGGGCTAG ACGCCGAGTT TCACTTATAC GGCGACAAAG CCCTAGAACT CAACCGTAGA
GAGATTAAAG AACTGAGGAA GTTGGGCATA GCGGTAATGG CCTCTGTACA CAGAGACCGG
GGGCTTAGGC ACATTTCCGA CGTGGCGGTC TATGTGAGAA ACAGAAACGC CGTGGTATAC
TCGGCGCAGG GAAGGCGGGA GTGTCGCCTA GAGTACGAGC CGGCGCCCCA TCTACACTGC
TAG
 
Protein sequence
MELDFRGVTA IFGRPGVGKT SLAMRIAHER LSKGDRVLWV SLYEDREALI QNASSLGYDL 
SKAEIWDMIF VKTDAILNQI VSTVSQSDYG LVVVDSISSI VEGSQSREYL INAVYRVFRP
AGIDFIGISE EEAVTPLDYI ADNLIRLEMK FFNGAAERRM YVLKARGRRA GYYVEFDIIE
KRGVVFLDEL PRPQTKGGWE KYAEAISRAV GPVRGGNIYL FAGWGLTPLL AKTAADLSKD
GAKVLYRIFE RDASLVAALV ERFGGRAEVQ RVEPKPVNYL AHVAEFFEAL TNTSADVVIS
DGLDAEFHLY GDKALELNRR EIKELRKLGI AVMASVHRDR GLRHISDVAV YVRNRNAVVY
SAQGRRECRL EYEPAPHLHC