| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2118 |
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| Symbol | |
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| ID | 5054606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 1893381 |
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| End bp | 1894169 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640469670 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001154316 |
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| Protein GI | 145592314 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACTTCG CCGTGATTGG GACGCAAGTG AGAGGCAAGT CGGCCAGCCC AGCCATGCAC
ACAGCCTCCT TCAAGGCCTT GGGGATAGAT GCGGTGTACC TCGCAATCAA CGTGCCGAGG
CAGGAGCTGG GGTGCTTCGT TCAGCTGGCC CGCCTCAACT TAAGGGGGTT CAACGTGACC
ATCCCCCACA AGGAGGAGGT GTTAAAATAC CTAGACAGGT TGGCCCCCGA CGCGCGGGAG
ATCGGTGCAG CCAACACCGT GCTGGTGGAG AGGAATCTGC TAATAGGTTA CAACACAGAC
GCCTACGCAG TCTACAACCT CGCCGGGAAG GAGATGAGGG GGGCAGACGT CCTCATACTA
GGCGCCGGCG GCGCCGCAAG GGCCGCTCTC TACGCGGCCA TAAAGGCAGA GGCGAGGAAG
ATCTACGTCA CGAACCGTAC TGCTGAGAGG GCCGAGGCCT TGGCGAGGGA GTTCAGGGAG
AAGTTCGGCA GGCCGGTGGA GGCCGCTCCC TGGGGATCTG CCCCAAAGGC AGACGTAGTT
GTAAACGCAA CGCCGGTTCA CGACGCTGTG CTAGCCGACC TAAGTGAGGC ATCCACGTAC
ATAGACTTCG TCTACATACC GACGCCCCGC ACCAAGATGG TGCAGGAGGC GGAGAGGCTA
GGTGTGAGGG TAGTAGACGG GGTCGACCTC CTCGTGGAGC AAGGCGCCGA GGCGGAGCGG
ATATGGCTAG GCGTTGAGCC GAACAGGGAG GTAATGAAGA AGGCAGTCCT CCACTTCCTG
GGGCTATGA
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| Protein sequence | MYFAVIGTQV RGKSASPAMH TASFKALGID AVYLAINVPR QELGCFVQLA RLNLRGFNVT
IPHKEEVLKY LDRLAPDARE IGAANTVLVE RNLLIGYNTD AYAVYNLAGK EMRGADVLIL
GAGGAARAAL YAAIKAEARK IYVTNRTAER AEALAREFRE KFGRPVEAAP WGSAPKADVV
VNATPVHDAV LADLSEASTY IDFVYIPTPR TKMVQEAERL GVRVVDGVDL LVEQGAEAER
IWLGVEPNRE VMKKAVLHFL GL
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