| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2064 |
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| Symbol | |
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| ID | 5056398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 1845904 |
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| End bp | 1846881 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640469613 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_001154262 |
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| Protein GI | 145592260 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02088] isopropylmalate/isohomocitrate dehydrogenases |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.189691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGTATA AGGTTTTGGT AATACCGGGG GACGGCGTGG GGCCAGAAGT GGTGGAGGCG
GCGCTGTATG TGATAAAAGC CGCGGCGTCT AAATACGGCG TGGATCTGGA AATTAAAACC
GCAGAGGCCG GCGACGCGGC TTTGAGGAAA TATGGCACCG CCATGCCTCC AGAGGCGTTG
AAGCTTGCCG ACGAGGCCGA CGTGATTTTC AAGGGCCCCA TAGGGGAGTC GGCATACGAC
GTGACGTCGC TGATAAGGAT GAGATATCTC CTATACGCAA ATATCCGGCC GGTGAAAAAT
CTGCCAGGTG TGCCAGCGGT GAAAGAGATA GACTGCATAT TTGTCAGAGA AAACGTTGAA
GACGTGTACG TGGGCGCCGA GTACAGAGTC GGCGACGTGG CCATCGCGCT TAAGGTAATC
ACCGAGAAGG GCACGAGGAG GGTGGCGAGG GTGGCCAGGA AATACGCAGA GATGAGAGGG
AGAAGGGTCA CAATTATCCA CAAGGCGAAT GTGCTGAGAG TTGTCGACGC CTTTTTCAGA
GATGTAGCGA TGGAAGAGCT AAGGGGGCTT GAAGTGGATC AGATGTACGT AGACGCGGCG
GCTATGGAGC TTGTGAGAAA CCCCAAGAGA TTCGATGTGG TGCTCACCAC AAACCAATAC
GGCGACATCC TCACAGACCT CGCAGCGCAG GTGGCGGGGG GCATCGGCCT AGCCCCAAGC
GGCAATATCG GCGACTCCAA GGCCATGTTT GAGCCCGTCC ACGGGGCCGC GTTCGACATA
GCCGGGAAGG GAATCGCCAA CCCTATAGCC ACTATACTAT CTGCCGCAAT GATGTTCGAG
TGGATGGGCA GAAAAGACGT CGCCAACGCT ATAATAGTTG CGGTGGAAAA AAGCATTGAG
AAGGGCATAA AGACGCCAGA TATAGGTGGA GATAAGTCAA CAATAGAGGT AGGCAAATTC
ATAGCATCAA TTATATAG
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| Protein sequence | MPYKVLVIPG DGVGPEVVEA ALYVIKAAAS KYGVDLEIKT AEAGDAALRK YGTAMPPEAL
KLADEADVIF KGPIGESAYD VTSLIRMRYL LYANIRPVKN LPGVPAVKEI DCIFVRENVE
DVYVGAEYRV GDVAIALKVI TEKGTRRVAR VARKYAEMRG RRVTIIHKAN VLRVVDAFFR
DVAMEELRGL EVDQMYVDAA AMELVRNPKR FDVVLTTNQY GDILTDLAAQ VAGGIGLAPS
GNIGDSKAMF EPVHGAAFDI AGKGIANPIA TILSAAMMFE WMGRKDVANA IIVAVEKSIE
KGIKTPDIGG DKSTIEVGKF IASII
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