| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2059 |
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| Symbol | |
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| ID | 5054760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | - |
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| Start bp | 1840451 |
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| End bp | 1841920 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640469608 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001154257 |
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| Protein GI | 145592255 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02146] homocitrate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0773223 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTATATA GCTGGCTAAG CTTTTTAAAT AGTTGTTATC TGTGGTGGCA TGTCCCAGGG
GAAAGCCGCG TCTCAATACT AGACTCAACG CTTAGAGAAG GAGAGCAGAC TCCAGGGGTT
GTATTCTCGG AGGAGTGGCG TGTTAGAATT GCCAAGGCCC TCTCGGATAT AGGCGTTGGG
ATGATAGAAG TGGGCGATCC CAGCGTGGCC CCCGACATAA AGTCGGCGAT AAAGAAGATC
GTTAAGTTGA AGAAGGACGG CGAGATTAGA AGCCATATCG TCGTCCACAG CAGGGCGGTG
AAGCAAGATC TGGAAAACGC CGCGTCTCTG GAGCCGGATA GGGTCGCGGT GTTCTACGGG
GTGAGCGACT TGCACTTGAA GCACAAGCAC AGGAAGACGA GGGAGGAGGC GCTGTCCATA
ATTGCAGAGA TGGTCTCCTT TGCCAAGTCA CACGGCGTTG CTGTTAGGTT CACCGCAGAG
GACGCATCGA GGGCCGATCT CGGCTACTTG ATAGAGGTCG TAAAGACCGC ATATGAGGCC
GGCGCGGATC GGGTCAGCAT AGCGGACACG GTAGGGGTCT TCACGCCGGA CAGAGCCAGG
GAGGTGTTCG CCAAGGTGAA GGCCGCCGTG CCGGGGGTTG GGCTGGACAT ACACGCACAC
AACGACTTCG GGATGGCCGT GGCCAACAGC TTGGCGGCGG TTGAGGGCGG GGCAGACGTA
GTCCACACCA CGGTGAACGG GCTTGGGGAG AGGGCAGGCA TCACGCCCCT GCAAGTCTTC
GCCGCGGCTT ACTACTACCA CAAGGGGGTT AAGCTAGTGG AGCTGGAAAA GCTACCCGAG
ATAACCGCCA TGGTAGAGGC GGCCAGCGGG ATAACGCTGA TGCCGACATA CCCTATTGTT
GGAGAAAACG CCTTTACGCA CAAGGCCGGG GTACACCAGG CAGGCGTCTT GGCCAACCCC
GAGACGTACG AGCCGATCCC GCCAGAGGTG GTGGGGAGGA CGCGCGACTT CTCTCTGGAC
AAGTACAGCG GGAGGAAGGC TATCCAGCAC CGCTTGGAGA AGCTAGGCGT CTCGCTCCAG
CCTGAGGCCT TGGACAAGGT GGTGGAGGAG GTTAAGAGGA TGAACGCGCC TAGGCTGAGG
GACGAGGATT TGTTAGAGAT AGTGGAAAAG GTGTCCGGCG TCAGGTACAG GGCTATCGTC
AACAGGCACA TAGAGGCCTA CATCTGGCTT AAGGTGGCGA ACAACGTGTA CACCACCTCA
GTGGCGAGGA GGGTCGCCGC CTTGAAAAAC GTCGTGTCGG TCTCCGAAAT AACTGGCGAG
TACGACATCG TCGTTAAACT TGTGGCGGAG AACACCGAGG AGCTGAACCA GGCGATTGAA
AGCATAAGGC AGATCAAAGG CGTCGCCTCG ACCTTCACCA GTATTGTGCT GAAGGAGTTG
CCGACGATCA GCATGCAGAC CAGGGCTTAA
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| Protein sequence | MLYSWLSFLN SCYLWWHVPG ESRVSILDST LREGEQTPGV VFSEEWRVRI AKALSDIGVG
MIEVGDPSVA PDIKSAIKKI VKLKKDGEIR SHIVVHSRAV KQDLENAASL EPDRVAVFYG
VSDLHLKHKH RKTREEALSI IAEMVSFAKS HGVAVRFTAE DASRADLGYL IEVVKTAYEA
GADRVSIADT VGVFTPDRAR EVFAKVKAAV PGVGLDIHAH NDFGMAVANS LAAVEGGADV
VHTTVNGLGE RAGITPLQVF AAAYYYHKGV KLVELEKLPE ITAMVEAASG ITLMPTYPIV
GENAFTHKAG VHQAGVLANP ETYEPIPPEV VGRTRDFSLD KYSGRKAIQH RLEKLGVSLQ
PEALDKVVEE VKRMNAPRLR DEDLLEIVEK VSGVRYRAIV NRHIEAYIWL KVANNVYTTS
VARRVAALKN VVSVSEITGE YDIVVKLVAE NTEELNQAIE SIRQIKGVAS TFTSIVLKEL
PTISMQTRA
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