| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2042 |
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| Symbol | |
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| ID | 5055314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 1825312 |
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| End bp | 1826127 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640469591 |
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| Product | shikimate kinase |
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| Protein accession | YP_001154240 |
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| Protein GI | 145592238 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1685] Archaeal shikimate kinase |
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| TIGRFAM ID | [TIGR01920] shikimate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTGCG CAAGGGCTTG TGCCTGGGGC GGCGGCACCA TCATCAACGC CATCGCCACG
GGCCACGGCG CGGCTTTCCC CATATCGCTG AGGGTTATGG CGGAGGTCTG CCGCTCAGAC
CGCTTGGAGG TGGCCACCTA CGCAGACGTC GACGTGGAGC CGATACGGAA AGTTGTGCAG
ATGGTGGCCG AGCGGTGGGG GGTCGGCCCC GTCGCCGTCA AGATCACGGG GGACCTCCCC
CCCGCCGGCG GGCTGAAGTC CAGTAGCGCG GTGGTGAACG CCCTTGTGTC GGCCACGGCA
AAGCTGGCGG GGGCAGACGT CGACCTCTTC GACGTGACGA GGATAAACGC CCAGCTGAGC
AGAGAGGTGG GGATAAGCGT TACTGGGGCC TTCGACGACG CGGTGGCCAG CGCCACGGGG
CGGAGCTACC TCACAGACAA CTACAAGCTC GTGGTGATAA GGGAGCTGGA CGTGTCGGGG
AAGGCGGTGG TGTTGATACC CCCCTACGAG AAGAGGAGGC ATAAGCTTCA GGAGATGAGG
GCCTTGGCGC CCGTGGTGAG GACGGCTGTG TCATTTGCCG GAATGGGCAT GTGGAGAGAG
GCCATGCTGA TAAACGCCGT CGCCTACGGC TACGCCCTGG GCTACCCGCC CGAGCCCACC
CTCGAGGCCC TTCAACTGGG CGCAGTCGGC GGAGTCTCCG GCACAGGCCC CTCCCACGTC
TTCATCACAG ACAAGCCCGA GGAGCTGGCC GAGGCCCTCT CCAAATACGG CAAAGTCTAC
GTGGTTGATA TCCCGCAATC CCCATGCACG CCGTAG
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| Protein sequence | MDCARACAWG GGTIINAIAT GHGAAFPISL RVMAEVCRSD RLEVATYADV DVEPIRKVVQ
MVAERWGVGP VAVKITGDLP PAGGLKSSSA VVNALVSATA KLAGADVDLF DVTRINAQLS
REVGISVTGA FDDAVASATG RSYLTDNYKL VVIRELDVSG KAVVLIPPYE KRRHKLQEMR
ALAPVVRTAV SFAGMGMWRE AMLINAVAYG YALGYPPEPT LEALQLGAVG GVSGTGPSHV
FITDKPEELA EALSKYGKVY VVDIPQSPCT P
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