Gene Pars_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2024 
Symbol 
ID5054136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1811416 
End bp1812168 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content58% 
IMG OID640469574 
Productprephenate dehydrogenase 
Protein accessionYP_001154223 
Protein GI145592221 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTGG GAATTGTGGG CGGCGGGACC ATGGGATCAT GGCTGAAGAG GGAGATGACC 
TCTTTACACG AGGTGAGGAT TTTCGACGTA GATAAGTCGA GATCCGACGT GGGCTCTTTA
GAGGAACTGG CCCTGTGGGC CGAGGCGCTG ATTGTGGCCG TGCCGTTTTG GGAGACAAGC
GGCGTGCTTA AGGCGCTGGC CCCCCTTTCC CGGGGGAGGC TTGTAATGGA CATCGCCACT
TTTAAAGAGG GCGTGGTGGA GACCTACGGC TTGTTCCCCC AAGACGCCCT CGTCGCCACT
GTCCACCCCC TCTTCGGCCC CGGGGCCTCT TCTATCCGCG GCCAGAGGGT TTTAATAATG
GCGGTGCCGG GGCGCCGGGG GGCCGAGGAG GCTTTTCGCT TCTGGTCTGA GCTGGGGGCC
AGGGCCGAGT GGGGGGAGTT GGAAAAGCAC GACTTCTACG TCTCGAGGAC TATAGCCTTG
AGCTACGCCG TGGGGCTGGC CTTGGCTAGG CTTTATGGCG AGCTGGGAGA TGAAGTGTTT
AAATACGGCG GGACGTCGTT TAAGTACCTT GCTACTTACG CCTTTTCCCT CCTCAGAGAT
CCCAACGCCG CGAAGTACGC AGAGAAAGCC CCTATAGATG AATTCATAGG CTTTCTCAAA
AGGGAGGACG CGCCAAAAGC CCTTATAGAT CCAGACGCGG CGTACAGGGC TTTTTACAAA
GCCCTTGAGG CAATGGGCGA GATCCAGAGG TAA
 
Protein sequence
MRVGIVGGGT MGSWLKREMT SLHEVRIFDV DKSRSDVGSL EELALWAEAL IVAVPFWETS 
GVLKALAPLS RGRLVMDIAT FKEGVVETYG LFPQDALVAT VHPLFGPGAS SIRGQRVLIM
AVPGRRGAEE AFRFWSELGA RAEWGELEKH DFYVSRTIAL SYAVGLALAR LYGELGDEVF
KYGGTSFKYL ATYAFSLLRD PNAAKYAEKA PIDEFIGFLK REDAPKALID PDAAYRAFYK
ALEAMGEIQR