| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1989 |
|---|
| Symbol | |
|---|
| ID | 5055306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 1779375 |
|---|
| End bp | 1779899 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640469536 |
|---|
| Product | putative RNA-binding protein |
|---|
| Protein accession | YP_001154188 |
|---|
| Protein GI | 145592186 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2016] Predicted RNA-binding protein (contains PUA domain) |
|---|
| TIGRFAM ID | [TIGR00451] uncharacterized domain 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGGA TAAGGCTCAG CAACAAGGAA GTGAGGGAAC TCCGCGCGGC TAATAAGGCA
ATGGCGCCTA TACTTGAAAA AGCTGACGTG GTAGAAGTAG CGCAGCTCTC CGAGAAGGAG
AGCATATACC TAATAGACGG AGAGCCTCTG TTTGTAAAGG TAGCCATACC CGACTTAGGC
GACGTCATCG CCCCCACGCT ATTCCTAATA CACAAATCTA GCAAGGCCAG TCTATTGTCT
ACGTACCCCA AGGCGGTGGT AGATGCTGGG GCTGTAAAGA GAATAATAGA CGGAGCCGAC
GTGATGAGGC CCGGAATCAA GCACCTCGAC GGCGACTTCG AAAAGGGAGA TGTAGTATTT
GTTACAGATG AGAAAGGGCG TGTAATAGCC ATGTCAGTTG CCCTATTCTC TAGGGCTGAA
ATAGAACAGA TGCAGAAGGG CAAGGTTCTA ATAAACATTC ACTACCTTGG AGACAAAATA
TGGCGCGCCT CCCAGGAGCT GGCCAAGAAG ACAAGCTCTG AGTAA
|
|---|
| Protein sequence | MRRIRLSNKE VRELRAANKA MAPILEKADV VEVAQLSEKE SIYLIDGEPL FVKVAIPDLG
DVIAPTLFLI HKSSKASLLS TYPKAVVDAG AVKRIIDGAD VMRPGIKHLD GDFEKGDVVF
VTDEKGRVIA MSVALFSRAE IEQMQKGKVL INIHYLGDKI WRASQELAKK TSSE
|
|---|
| |