Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1964 |
Symbol | |
ID | 5054579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 1762146 |
End bp | 1762688 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640469511 |
Product | phosphoribosyltransferase |
Protein accession | YP_001154163 |
Protein GI | 145592161 |
COG category | [R] General function prediction only |
COG ID | [COG2236] Predicted phosphoribosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0577675 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTTG AGATCGGCGG CATAAAGGTG AGGTTCATCA CGTGGGCTGA AGGGGTAGCA CTCAGCGAGG CCCTGGCTAG GAAAGTTGAG GAGAGCGGCT ACGTCCCCGA CGTTGTGGTG GCCATATCGC GCGGCGGGCT GGTCCCGGCC CGTATTATCA GCGACGTGCT TGGCGTAGAC GACGTAATAA GCATCGGGGT GAAGTACTGG GGCTTAGCCC ACCGCCGGGC CGAGAAGCCG GTGCTCTACC ACAGCATAGA GCCCGGCGTG ATACGAGATA GAAAGACTCT GGTCGTAGAC GAAGTCGCCG ATACGGGCCA CACCCTTATG CTTGCCAAAA ACCTACTAGA CCTCATGGGG GCTAGAGAGG TGAAAACCGC AGTCCTACAC TTAAAAACCA CCAGCAGATT CATCCCCGAC TACTACGCAG AGAAAATAGA AGAGTGGATC TGGCTTTCAT ACCCGTGGAG CCGACATGAG GATTACAGAG AGTTCAAGAA AAAAGGTCAC GACATCTCCA TGTACATAAA CAGAATCTGT TAA
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Protein sequence | MAVEIGGIKV RFITWAEGVA LSEALARKVE ESGYVPDVVV AISRGGLVPA RIISDVLGVD DVISIGVKYW GLAHRRAEKP VLYHSIEPGV IRDRKTLVVD EVADTGHTLM LAKNLLDLMG AREVKTAVLH LKTTSRFIPD YYAEKIEEWI WLSYPWSRHE DYREFKKKGH DISMYINRIC
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