Gene Pars_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1964 
Symbol 
ID5054579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1762146 
End bp1762688 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content54% 
IMG OID640469511 
Productphosphoribosyltransferase 
Protein accessionYP_001154163 
Protein GI145592161 
COG category[R] General function prediction only 
COG ID[COG2236] Predicted phosphoribosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0577675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTTG AGATCGGCGG CATAAAGGTG AGGTTCATCA CGTGGGCTGA AGGGGTAGCA 
CTCAGCGAGG CCCTGGCTAG GAAAGTTGAG GAGAGCGGCT ACGTCCCCGA CGTTGTGGTG
GCCATATCGC GCGGCGGGCT GGTCCCGGCC CGTATTATCA GCGACGTGCT TGGCGTAGAC
GACGTAATAA GCATCGGGGT GAAGTACTGG GGCTTAGCCC ACCGCCGGGC CGAGAAGCCG
GTGCTCTACC ACAGCATAGA GCCCGGCGTG ATACGAGATA GAAAGACTCT GGTCGTAGAC
GAAGTCGCCG ATACGGGCCA CACCCTTATG CTTGCCAAAA ACCTACTAGA CCTCATGGGG
GCTAGAGAGG TGAAAACCGC AGTCCTACAC TTAAAAACCA CCAGCAGATT CATCCCCGAC
TACTACGCAG AGAAAATAGA AGAGTGGATC TGGCTTTCAT ACCCGTGGAG CCGACATGAG
GATTACAGAG AGTTCAAGAA AAAAGGTCAC GACATCTCCA TGTACATAAA CAGAATCTGT
TAA
 
Protein sequence
MAVEIGGIKV RFITWAEGVA LSEALARKVE ESGYVPDVVV AISRGGLVPA RIISDVLGVD 
DVISIGVKYW GLAHRRAEKP VLYHSIEPGV IRDRKTLVVD EVADTGHTLM LAKNLLDLMG
AREVKTAVLH LKTTSRFIPD YYAEKIEEWI WLSYPWSRHE DYREFKKKGH DISMYINRIC