| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1938 |
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| Symbol | |
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| ID | 5054932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 1741584 |
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| End bp | 1742414 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640469484 |
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| Product | exosome complex RNA-binding protein Rrp42 |
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| Protein accession | YP_001154137 |
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| Protein GI | 145592135 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2123] RNase PH-related exoribonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCTG TCTCGCCTTA CGCAAGGCGT TTCATCTCTT ACCTAAGGCG AGAGCAGATC
AAGCGCCTCG CCGCTTCGAA AAACAGAGTA GATGGGAGGG CCCTCGACCA GACAAGAGAA
ATTGAGATAA AGACTGGGGT TGTCAAAACT GCGGATGGGT CGGCCGAGGT GAAGCTGGGG
AAGACCCATG TGATTGCCGG CGTTAAGGTG GGCCTAGGCC AGCCGTTCCC AGACGCGCCC
GATGAGGGGG TGTTGGTAGT AAGCGCAGAG GTTTTGCCCC ACGCCTCGCC CTACACCGAG
GTGGGGCCGC CCGACGAGTC GGCAATAGAG CTGGCTAGGG TTGTGGACCG CGGCATTAGG
CACTGCGGCT ACGTCGATTT CAAGAAGCTG GCGGTGGAGG GAGGCAAGGC CTACGTCCTT
TGGGTTGACC TGTACGTTAT AAACGACGAT GGCAACTTGG TAGACGCCGC TAACTTGGCC
TCCGTGGCCG CCTTAAAAAA CACTCAGCTA CCCGCCGTAG TAAAGGACGA AAGCGGGGCC
GTGAAGCTTG ACCGCAATAA TAAGTCGCCT TTGCCGCTCG AGACAAGCAA AGTGCCGGTC
GCTGTCTCTG TGGGAAAAAT CGCCAATGTG TTATTCCTAG ATCCCAACTT CGAGGAGGAG
CTAAGTCTTG ACGGCCGTGT CACATTCACT ATTTCCGAGG ACAGGATAGT GGCGGCGCAG
AAGACGCTTG GCTACTTCAC ACAGCCAGAG CTAGAGGCGG CTCTAGACTT GGCGATAAAA
GGAAGAGACA GATACCTCGA AGCTCTAAAG AGCATCTTAG GAAGCTCGTA A
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| Protein sequence | MASVSPYARR FISYLRREQI KRLAASKNRV DGRALDQTRE IEIKTGVVKT ADGSAEVKLG
KTHVIAGVKV GLGQPFPDAP DEGVLVVSAE VLPHASPYTE VGPPDESAIE LARVVDRGIR
HCGYVDFKKL AVEGGKAYVL WVDLYVINDD GNLVDAANLA SVAALKNTQL PAVVKDESGA
VKLDRNNKSP LPLETSKVPV AVSVGKIANV LFLDPNFEEE LSLDGRVTFT ISEDRIVAAQ
KTLGYFTQPE LEAALDLAIK GRDRYLEALK SILGSS
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