| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1925 |
|---|
| Symbol | |
|---|
| ID | 5055134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 1731086 |
|---|
| End bp | 1731583 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640469471 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001154124 |
|---|
| Protein GI | 145592122 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2890] Methylase of polypeptide chain release factors |
|---|
| TIGRFAM ID | [TIGR00537] HemK-related putative methylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.235026 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTACC AACCCGCCGA GGATAGCTAC TTGACCCAGG AGGCCGTAGA CGCCTTGGAG
GGAGCCGACG TCTGCTTAGA TGTGGGCACC GGGTCTTGTA TATTGGCAAA AGCTCTAAGA
CACAAATGTA GAAGGGTCGT CGCAGTCGAC GTTGACTTGG GGGCTTGCAA GTCATGTCCT
CCAGAAGTAG ACGTTCTCTG CAGCGATGCA GCGTGGGGGA TTAGAAGAGC TGACATCGCG
GTGTTCAACT TGCCATATCT CCCGCCCGAG GATCCGCTAG ATGTCTCCAT CCACGACGTT
GGCATTGTGC CGAAGTTTCT GCGTTGGATA TCCGCCACCA GGCCACGCGT AGTTGTGCTA
ACATTCAGCT CATTAGGCAG AGCTGACTTC GTAATGGATG CGTTGAGAAC GATGTGCACA
GTAATACGAA CGGCTAGGCT CCACTTGTTC TTCGAGTCAA TCTACACCGT TACGGCCTTG
TGTGGACCTA GCCTATAA
|
|---|
| Protein sequence | MPYQPAEDSY LTQEAVDALE GADVCLDVGT GSCILAKALR HKCRRVVAVD VDLGACKSCP
PEVDVLCSDA AWGIRRADIA VFNLPYLPPE DPLDVSIHDV GIVPKFLRWI SATRPRVVVL
TFSSLGRADF VMDALRTMCT VIRTARLHLF FESIYTVTAL CGPSL
|
|---|
| |