Gene Pars_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1873 
Symbolrpl15p 
ID5055751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1677160 
End bp1677627 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content53% 
IMG OID640469419 
Product50S ribosomal protein L15P 
Protein accessionYP_001154076 
Protein GI145592074 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0200] Ribosomal protein L15 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGCC GTTTTAAGCG AGCTGTGAAG TATAGACGTG GTAGCAGAAC CCACGGCTGG 
GGGAGAGTGG GGCAACACAG GAAGAGCGGA GGCTCCGGCG GCAAGGGAAT GGTGGGGTTC
CATAAACACA AGTGGTCGCT AGTCATGAAA TACGGCGAGA GCGGCACAGG CTGGCCTTTC
TATGGCAAAC ACGGCTTTAA GCAACCGCCA ACTATTACAG TAGAGTGGAG ACCTATCAAC
GTCGGCACCT TGGCAGAAGT CGTGAGAGAA CTGAAATCGG AGGGAAAGAT AAGAGAAGAG
GGCGGAAAAT ACGTTGTTAA CCTCCTGGAG CTGGGGTACA ACAAGCTACT TGGGGGAGGC
TCCATAGATG TACCTGTCAT TGTCTACACA CCCGTAGCCA GCAAGACAGC TGTGGAGAAG
ATCCAAAGAG CGGGCGGAGA GGTGAGAGTA GTAGCAATAC ATAGGTGA
 
Protein sequence
MVRRFKRAVK YRRGSRTHGW GRVGQHRKSG GSGGKGMVGF HKHKWSLVMK YGESGTGWPF 
YGKHGFKQPP TITVEWRPIN VGTLAEVVRE LKSEGKIREE GGKYVVNLLE LGYNKLLGGG
SIDVPVIVYT PVASKTAVEK IQRAGGEVRV VAIHR