Gene Pars_1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1856 
Symbol 
ID5056029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1658757 
End bp1659419 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content55% 
IMG OID640469402 
Producthypothetical protein 
Protein accessionYP_001154059 
Protein GI145592057 
COG category[R] General function prediction only 
COG ID[COG0121] Predicted glutamine amidotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0526188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.336481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGTAGGC TATACCTCTC TAAGGGCTCC GTAAATCTTT CCAAGGCTCT TAAATTTGCC 
GCGCGGTATG ACCCCTACGC ACCAAGCGAG AAAAAGCAAC ACGGCGACGG TTGGGGCTTC
GTAGCGGCTA CGCGCCTCTC GTTTATGTAT TACAAATCCG CCGCACCGGC TTGGGAAGAC
CCAACCCCCG TGCCCATGTG GGAGGCGGTA TTAGCGCACG CAAGGGCTGC CTCCATCGGC
GAGCCGCTGG GCGCTGAGCA TGCCCATCCC TACGCGGTTC ATCTGCCTAA CGGGGGGATG
ATTTTCGTCG CCCACAACGG CTCTGTGGAT AAATACTCCC TCGCCGCCGA AGTCGGCATC
GACCCCAACC GCCATACGGA CAGCTATGTG CTTGCTTTGT ACCTCGCCCG CCACTGGGAT
GACCTAGAGA AGGCTCTGGA TAATGTAGCT AATCTGTACA TGAAGACAGC TCTAAACGTA
GTCATCTTGG AATACCCCAG CCTCCGGTCG TTTGCTTACT CCCGCTATAA GGGCAACCGC
AACTACTACG CCTTGTATAT TTTAAAGGCC AAGGACTACA CTGCCGTTGT GTCTTCCACT
CTTCTCAGAT ACTTGGACGT GGAGGGAGAG GAGCTGGCGC AAGGAGAGTT ACTAACTTTC
TGA
 
Protein sequence
MCRLYLSKGS VNLSKALKFA ARYDPYAPSE KKQHGDGWGF VAATRLSFMY YKSAAPAWED 
PTPVPMWEAV LAHARAASIG EPLGAEHAHP YAVHLPNGGM IFVAHNGSVD KYSLAAEVGI
DPNRHTDSYV LALYLARHWD DLEKALDNVA NLYMKTALNV VILEYPSLRS FAYSRYKGNR
NYYALYILKA KDYTAVVSST LLRYLDVEGE ELAQGELLTF