Gene Pars_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1800 
Symbol 
ID5055759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1616014 
End bp1617051 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content47% 
IMG OID640469345 
Producthypothetical protein 
Protein accessionYP_001154003 
Protein GI145592001 
COG category[T] Signal transduction mechanisms 
COG ID[COG0467] RecA-superfamily ATPases implicated in signal transduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.13462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAATA TTGTGTTTGT TTTACAGGAG GTAGCGACTA AGGGTTTTAC TGTGGTGTAC 
GGCCCACCTG GTAGTGGAAA GACTAGCGTA GCAGCGAAGA TGGCGGATAG GGTCGCTAAT
AGAATTTTTT GGATTAGTAC CAACGAGTCT CCCGGGATTT TGAAAGAAGT ATTTATGCGC
GTTGGAGCGA AGGCCGAGAA GTTCTACGTT TTTGACTTCC CCCGCGCCTT TAGGGGAAAC
GTCGCAAAGT TTATCGCAGA TCACATACAC GAGTACGAGG CGCTTGTGGT AGACGCTGTG
ACAGGCATCG CGGCGCAAGA GGAGAAGCTA GAAGAGCTTG TCCACGGCTT CCTTTACCAA
CTTGCTAAGG ACATGCCAGT GGTGGCTGTG GTGGAGGGAA CACCGAAAAA GATATTCTAC
ATAGCAGATA ACTTGGTTAA AGTAAGCTAC AAAGAGAACG CCTTGGGGCA CACAGTCCGG
TATATTAAGC TTGTTAAGTC CCGATTTGCT CCGCCAAGCG AGCGCTACTT GTTCGACTTC
GTAGAGGGGG TTGGGCTTGT CTACATTTAC ACCCCCCAGA GGCCGCAGGT AGCCAAAATC
CCCCTCGAAG AAGATGCCGC AATTCTTGGC ATCAACGAGC TCTACAAGTC ACAAATAGTG
GGAGTATTTG GAAAAGATAA AAGATCGTTG GCAAGAAAAC TTCAAGAAGT GGCCCAGTCG
CGCGAGTTGT TTTACCTTTC GCTATTTCCT CCCACAACGC TACCCGCAGA TCTCGACGAG
AACAAAGTCA AAATAGCAAC TACCTTTAAG GATCTTGTAG AGACGGTTTA CGAAATTTAC
TCAGGCCGCC TTAAGCCTAG AGTTTTCGCG GTCTCGGGTC TGCGGGATGT TGAAAGGATA
GCTGGGAACG ACGTAGTAGA TTACATAAAC GCGGTGGCGA GTGTGGCAAA ATACGTAGAT
TATATACTAG ATTTTGAAAT AGAGGCACCC GGCGCTAGGA TAGTGGACTC TTTTCTTGAC
ATAAAAATAG AAGCTTAA
 
Protein sequence
MHNIVFVLQE VATKGFTVVY GPPGSGKTSV AAKMADRVAN RIFWISTNES PGILKEVFMR 
VGAKAEKFYV FDFPRAFRGN VAKFIADHIH EYEALVVDAV TGIAAQEEKL EELVHGFLYQ
LAKDMPVVAV VEGTPKKIFY IADNLVKVSY KENALGHTVR YIKLVKSRFA PPSERYLFDF
VEGVGLVYIY TPQRPQVAKI PLEEDAAILG INELYKSQIV GVFGKDKRSL ARKLQEVAQS
RELFYLSLFP PTTLPADLDE NKVKIATTFK DLVETVYEIY SGRLKPRVFA VSGLRDVERI
AGNDVVDYIN AVASVAKYVD YILDFEIEAP GARIVDSFLD IKIEA