| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1771 |
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| Symbol | |
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| ID | 5055373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 1590984 |
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| End bp | 1592219 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640469316 |
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| Product | putative pseudouridylate synthase |
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| Protein accession | YP_001153974 |
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| Protein GI | 145591972 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1258] Predicted pseudouridylate synthase |
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| TIGRFAM ID | [TIGR01213] conserved hypothetical protein TIGR01213 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.524292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0084243 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGAGTTAA TATCCAAGGC CCTAGAGGCG GTGAGGAGAT ATCCCCTGTG CGACTCTTGT
CTAGGTAGGC TTTTTGCCCT AATGGGATAC GGCATTGAAA ACCGGGAGCG TGGCCAAGCC
ATCAAGACCA TCCTGCACAT GGCCGCAGTC TCAGACTATA GAAAGGGGAA AGATGTTACG
GCAGACCTCA TCGCATTGGC CAAATGCCAC CTCCCTACGA GAAGGTTTCT GGCAGGCGTT
GGGATAAGAG TAGACGAGGA AAGGTGCTAT ATCTGCGGCG ATCTGATGGA GGGGGTTGAA
AAATACGCAG AGATGGCTGT TGAGCAACTA CGCGGCTTAG ACTTTGTAAG CTTCGCTGTG
GGTTCTACGC TTCCAGAAGA GTTGCTTGAG AAGGAGGCTG AGGTGGTAAA GAGTCTTCTT
GTCACTACCG GTGAGTCGGT AAAGCATGAA GTAAACCGAC GCATCGGTAA GGAGCTTCTG
AGACGCCTTT CTGACAAGAG AGTAGACAAG CTAAGACCTA ACGTGGTGGT GAATGTAGAC
TTGGTAAGCG GCCAAGTAAA GGTGGTAAGA AACCCCATTC TTATTGGAGG CCGTTATCTC
AAGCTTGGGC GGAAAATTGC CCAGGCAAAA AGATTTGGTA ATGTGCGAAC GACGTTGCTA
GAAAAATTGG CCTATCTACG TGATACGTTC GGCGGAGAGG ACCACGTAAT ACATGTATCG
GGTAGAGAAG ATAGCGATGC GCGTATGCTT GGTAGCGGCC GTCCACTAGT TGTCGAAGTA
AAGCAGCCGC TTAGATACAC CGCCCAGGTA GCCCCGTTTA GAGATAAAGA CGTAATTTTT
CTTCCTGTGG GGTTTACCGA CAGAAATGAG GTAAGAAGGC TAAAGGAGAA GGCCAAGACC
GATATTAAGC TTTACCGGGT GCTTGTACTT TCAGAATCTC CGCTTAAACA GGATGACCTA
AGTAAGCTGT CTGCTCTTTC AGGCGCCACT GTTACACAAT ATACCCCGAG GCGGATAAAA
AGACTTCATC CGAGAAAAAA GAGGGTAAGG ATGGTCTACG ACGTGGCGTG GCGCCTCGTG
TCGCCGCACG TCTTTGAGCT CTATATAAGG TGCCAAGGTG GGCTATACGT AAAGGAATTT
GTACACGGCG ACGGCGGCAG GACCGCCCCA AACGTCGCAG AGCTTTTAAA TACTAGGTTA
GAAGTCCTAG AACTAGACGT CTTGTACATC GAATAG
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| Protein sequence | MELISKALEA VRRYPLCDSC LGRLFALMGY GIENRERGQA IKTILHMAAV SDYRKGKDVT
ADLIALAKCH LPTRRFLAGV GIRVDEERCY ICGDLMEGVE KYAEMAVEQL RGLDFVSFAV
GSTLPEELLE KEAEVVKSLL VTTGESVKHE VNRRIGKELL RRLSDKRVDK LRPNVVVNVD
LVSGQVKVVR NPILIGGRYL KLGRKIAQAK RFGNVRTTLL EKLAYLRDTF GGEDHVIHVS
GREDSDARML GSGRPLVVEV KQPLRYTAQV APFRDKDVIF LPVGFTDRNE VRRLKEKAKT
DIKLYRVLVL SESPLKQDDL SKLSALSGAT VTQYTPRRIK RLHPRKKRVR MVYDVAWRLV
SPHVFELYIR CQGGLYVKEF VHGDGGRTAP NVAELLNTRL EVLELDVLYI E
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