| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1756 |
|---|
| Symbol | argS |
|---|
| ID | 5055232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 1575382 |
|---|
| End bp | 1577274 |
|---|
| Gene Length | 1893 bp |
|---|
| Protein Length | 630 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640469299 |
|---|
| Product | arginyl-tRNA synthetase |
|---|
| Protein accession | YP_001153959 |
|---|
| Protein GI | 145591957 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0018] Arginyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00456] arginyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0324309 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.00414873 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGATCCTC TGAAGTTGCC TAAGCAAGAG TTCGCCGACG CATTAGGCAA AATATCTAGC
CGTCTGGGCT TGGCGGAGGT GCCCGAAATT GAGAAGACGC GTCGTTACGG CTACTTCTCG
GCAAGGTTTC ACAAATACAA GATCGACCCA ACGAGACTAA GGGATGCTGT GGAAGAGCTG
AGCAACGCCG GTTTTCAGTA CATCTCTGGT CTGTCCGCAG AGGGGCTTTA CGTCAATGCT
GACTTAAACG CAAAAAGGCT GGGGGAGCTC GTCTTCGAGG CTGTGGCTAA GATGGGGAAG
AAGTACGGAT TTACGGAGGA GTGTCAGCTG GGGTCTTTTC TGGTGGAGCA CACCTCTGCC
AATCCCATAC ACCCGTTGCA CATAGGCCAT GGCAGAAACG CCATACTGGG CGACTCGCTT
GCAAGACTGC TGAGGTTCTG CGACAACCGT GTGGAGGTCC ATTTCTACGT CGACGACTGC
GGCGTGCAGG TGATGTACGC AACAATTGGT TACAACGCTG TTAGGGATGA GGCCAGAGAG
TGGATTGAAA GAGCGAAGCC TGATCTTGTT GTTGGGCATA TATACTCGGC AACAAACGCC
GTGGCCGAGA TCGGCCGTCT TAAAAAAGAG GCGGAGAGAG CGCAAGACGA TGAGCACAAG
CGTAGTCTGA TAGGGGAAAT AGACGAGTGG GTGGCTGTGT TGAAGAGGCT TATGGAGAGT
GAGGGAGATC TAGTTGCCAA GGTTGTCGAG AGGCTTGGCC AGAGAGACGT GGCCGGGGAG
GCAGTGGAGC TGAATAGGCG CTACGAGGCC GGCGACCCCG AGGCAAAGAG GGTCGTACGA
GAGGTGGTAG ACCTCGTGCT GAGGGGGCAA AGAGAAACTC TTGCCAGGCT CGGCATCGAG
ATAGACAGGT GGGATTATGA AAGCGAGCTG GCGGTGTGGT CTGGCGAAGC TTCTCGCATA
GTTGAGGAAC TTCAGAGAAG GTGGCCCCAG TACGTTGAGT ATAAGGGCGG GGCGGTGGTG
TTCCGTGCCG ACAAATTCGT GGATGATTTC AAGCTCTGGG ATGTCTTAGA CTTGCCTAAG
TTCATTCCAC CTGTCACCTT GACGAGATCT GATGGGACCA CTCTCTATGT TACGAGAGAC
GTGGCCTACG CGCTGTGGCA GGCCCGGCAG GGATTCGACA AAGTTGTACG CGTAATCTCG
ACTGAGCAAA CCCACGAGCA GGCTCACGTC CGTATTATCC TCTACGCGCT TGGTTTTGAA
GACGTAGCTA AGAAGATTGT CCACTACGCC TACGAGATGG TTAATCTGCC GGGGATGAAA
ATGTCGGCGC GTCGCGGGCG ATATATCTCG CTTGATGAAA TACTTGACGA GGCAGCCGAG
CGCTCTGCTA GTTTAGTCAA AGAGAAGAGC CCGGAGATAG CTGGGGTGAT AGCTGAGAAG
GTGGGAGTGG GGTCGGTGAG ATATGCGTTC CTCTCCACCA GCCCGCGTAA GCCTATAGAG
TTTAGGTGGG AAGTAGTCCT AAACCTTAGG CAAAACTCAG GTACGTTCTT GCAGTACACC
TATGTGAGGG CCTACTCTAT TCTTGAGAAG GCGCCAGATG TGGAGAGGGC CTCCGTCCCC
GAGCAGATGC TAGAGGAAGA GAAGGAGCTT CTTGTAAAAA TTGCCGAGTG GCCTAGTGTT
GTGAGAGAGG CCGTGAGGGC GCTTAGGCCG GACTACGTGG CGGAATACCT AGACGGTTTG
GCGTTGCTTT TCAACAGCTA TTACGAAAAG GCGCCGGTGC TCAAGGCTGT AGAAGGCGTC
AGGAAGTTCA GAATAGCGTT GGTAAACGCC GTGAAGACGG TGCTGGAGGC TGGGTTCTAC
ATCCTGGGCA TACCAACGCT GACAAAGATG TGA
|
|---|
| Protein sequence | MDPLKLPKQE FADALGKISS RLGLAEVPEI EKTRRYGYFS ARFHKYKIDP TRLRDAVEEL
SNAGFQYISG LSAEGLYVNA DLNAKRLGEL VFEAVAKMGK KYGFTEECQL GSFLVEHTSA
NPIHPLHIGH GRNAILGDSL ARLLRFCDNR VEVHFYVDDC GVQVMYATIG YNAVRDEARE
WIERAKPDLV VGHIYSATNA VAEIGRLKKE AERAQDDEHK RSLIGEIDEW VAVLKRLMES
EGDLVAKVVE RLGQRDVAGE AVELNRRYEA GDPEAKRVVR EVVDLVLRGQ RETLARLGIE
IDRWDYESEL AVWSGEASRI VEELQRRWPQ YVEYKGGAVV FRADKFVDDF KLWDVLDLPK
FIPPVTLTRS DGTTLYVTRD VAYALWQARQ GFDKVVRVIS TEQTHEQAHV RIILYALGFE
DVAKKIVHYA YEMVNLPGMK MSARRGRYIS LDEILDEAAE RSASLVKEKS PEIAGVIAEK
VGVGSVRYAF LSTSPRKPIE FRWEVVLNLR QNSGTFLQYT YVRAYSILEK APDVERASVP
EQMLEEEKEL LVKIAEWPSV VREAVRALRP DYVAEYLDGL ALLFNSYYEK APVLKAVEGV
RKFRIALVNA VKTVLEAGFY ILGIPTLTKM
|
|---|
| |