| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1750 |
|---|
| Symbol | |
|---|
| ID | 5055131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 1571804 |
|---|
| End bp | 1572391 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640469293 |
|---|
| Product | putative nucleotide binding protein |
|---|
| Protein accession | YP_001153953 |
|---|
| Protein GI | 145591951 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1491] Predicted RNA-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000113303 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.00274697 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGAA GAAGAGAAGA ATACGCGTAC GTAGTAGACA TTTTGCCGCC TGAAGTCGCC
GTGTATAAGC TTCCTCCAAA AATAAGAAGA GAATTTCCTC ACGACGTTTC CTATGCCCAC
CTAGTTGGAG AGCTCCACTT CACACTCTTA GAAGTCACTC TGAAAAAGGG CGTAAGCGTG
GAAATAGGCG AAAGAGTATA TGTGGGTCAG GGGGCTAGGG ACAAAATAGA CAAGATAGTG
AGGAGGATCC GATACGAAGA TCTTCAGCCC CAGGGCCGAG AAAACCTCAA AGCAGTTGTG
AGGAAGATAG TAGAACAACA AGAACAGAGA TTTGTAAAGT GGCTCAACGA AGCTGGGCCT
ATCACATTAA AGCTACACAG CCTTGAGCTC CTAAGAGGGG TTGGCAAGAG GAAGGTCCAA
GAAATTCTAG AAGAGAGAAA GAAAAGACAA TTCACATCCT ACGAAGATGT AAAACAGAGA
ACTGGGATAG ACATCAAAGA GCTAATTTCC GACAGGATTC TTAGAGAAAT AGCGGGTGAA
GACCCGTACT ATCTTTTTGC CTCTCCCCCA CCTGCGACGG GGCAGTAA
|
|---|
| Protein sequence | MKGRREEYAY VVDILPPEVA VYKLPPKIRR EFPHDVSYAH LVGELHFTLL EVTLKKGVSV
EIGERVYVGQ GARDKIDKIV RRIRYEDLQP QGRENLKAVV RKIVEQQEQR FVKWLNEAGP
ITLKLHSLEL LRGVGKRKVQ EILEERKKRQ FTSYEDVKQR TGIDIKELIS DRILREIAGE
DPYYLFASPP PATGQ
|
|---|
| |