Gene Pars_1749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1749 
Symbol 
ID5055077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1571472 
End bp1571807 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content43% 
IMG OID640469292 
ProductRNA polymerase Rpb4 
Protein accessionYP_001153952 
Protein GI145591950 
COG category[S] Function unknown 
COG ID[COG1460] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000570963 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00241129 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGGCGTGA AGAGGATAAG GAAGTCAGAA GAACTCACTA ATGCCAAGGC TTTGGCGATA 
CTGAGAGAAC TTGCGTCAAC TACCCAGCTG ACAGAGGAGC AGCGAAAAAC TTTAGACTAC
CTTGAAAAAG TCGCTGTTAG GACGCCTGAG GAAGCTGAAA ACATTGTTAA GCAATTAGTC
GAAAAATTTG GATTTACTCG GATAACGGCG ATACAGTTGG CAAATCTCCG CATAGACAAT
ATAGATGAAC TGCGCACAGT TCTTTCCTAT CTTGAAAAAA GAGAGTACTC AGAAAGCGAA
CTGAAGGAGA TACTCAAAGT TCTGACGGGA CAATGA
 
Protein sequence
MGVKRIRKSE ELTNAKALAI LRELASTTQL TEEQRKTLDY LEKVAVRTPE EAENIVKQLV 
EKFGFTRITA IQLANLRIDN IDELRTVLSY LEKREYSESE LKEILKVLTG Q