Gene Pars_1737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1737 
Symbol 
ID5054924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1563916 
End bp1564935 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content53% 
IMG OID640469280 
Productaminotransferase, class V 
Protein accessionYP_001153940 
Protein GI145591938 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.347432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00095198 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGTACC TCACCCCAGG TCCGGTGCAA CTTCCAAAAA CTGTGGTAGA CGCAATGGCG 
AGGCAGCCCC CGTTTCACAG AGGCGACGAG TTTAGACAGC TCTTTAAATC GGTACTGGAT
AAGCTCCAGG CGCTGTATTC AGCCACTAGC ATCGTAATGC CTGGCACAGG CACATTGGCT
GTAGATACTA TGATTTACAA CTATGTAAAC CCAGGCGAAA GGATATTAGC CATAGTATAC
GGCGAATTTG GCAAAAGGGC TGTGGAAAGC GCGAGGACAA GAGGCGCCGA TGTGGTGGAG
CTAGAGAGGG ACTTGCCGCC TCAGCCGGAT GAGGTGGAGG ACATACTGCG CAGGGACAGC
ACAATTAAGG CAGTGCTTTT AGTACACAAC GAGACAAGCA CTGGCATTGC TTACAAAAAC
CTCAAGAGGC TAGTTGATAT AACCAAGGCG TATGGCGTTT TGCTCCTTGT GGACAGCGTG
TCGGGATTCC CCGCGGAGCC TTTGCCCCCC GAGGTCGACG TAGTGGCCAC CGCATCTCAC
AAGGCGCTTT TGGCCCCGCC CGGCGCCTCG ATCCTATACA TTGGCGTTCA GCCCAGAGCC
TCTGGCGGAG TGCCGCCGTC TATGGATCTC CGGAAGTTTG TAAAAGCTCT TGAGCATCTA
GAGACGCCGT ACACCCCGCC GATCTCTGTG CTCTATGCGC TAGACGTATC GCTGAGCTAT
ATACTGGAGC TAGGCAAGAA GTACACGGAT ACACACCGAG AAAGAGTCGA GTATCTGTAC
TCAGCAGTGC GGCTGAACCC AATACCGCCT CCCGACGTGA GAAGCGTAAC GGTTACGGCT
TTTCTGTGCG AAAAACCAAA AGAGGCAATA GCCAAATTGC GAGAGGCGGG ATACGTCATC
GCTGGGGGAA TGTACAAGTA TAGAGACAGA TCTATCAGAA TAGGCGTTAT GGGCGACATA
ACTATGAATG ACTTAAAAGC TGTGGCCGAG GTTCTCAACG ATGTGGCTGG ACGAGGCTAG
 
Protein sequence
MKYLTPGPVQ LPKTVVDAMA RQPPFHRGDE FRQLFKSVLD KLQALYSATS IVMPGTGTLA 
VDTMIYNYVN PGERILAIVY GEFGKRAVES ARTRGADVVE LERDLPPQPD EVEDILRRDS
TIKAVLLVHN ETSTGIAYKN LKRLVDITKA YGVLLLVDSV SGFPAEPLPP EVDVVATASH
KALLAPPGAS ILYIGVQPRA SGGVPPSMDL RKFVKALEHL ETPYTPPISV LYALDVSLSY
ILELGKKYTD THRERVEYLY SAVRLNPIPP PDVRSVTVTA FLCEKPKEAI AKLREAGYVI
AGGMYKYRDR SIRIGVMGDI TMNDLKAVAE VLNDVAGRG