Gene Pars_1712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1712 
Symbol 
ID5054580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1545821 
End bp1546447 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content52% 
IMG OID640469255 
Producthypothetical protein 
Protein accessionYP_001153915 
Protein GI145591913 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.328153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.11413 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCTA CCATTATATT TACGGTGGCT ATTGCTGTGT TTGTTTTGTT ATCTATCGCG 
ATTGTATATA CGCGTTTAGG GTCTCCTTCC GTGCAAACGC CATCGCAACT TGGCGAGTTA
CCTCTACCTC CATGGGCCAT GTCTTTTGGA AACCCCAACG CGCCGGTAAC CGTTATCGAG
CTGTTCGACC TCCACTGTCC CTACTGCGCG TGGGCGCACA CACAGCTGGA CCCGCTGTAC
AAAAAGCTGG TTGGGGAAGG AAAGCTGAGG CTAATCTTTC TAGACCTCAT AGTGCACCCC
GACGCTCTGC TGGCACACCA ATACTTGCAC TGCGCGTACA GGCAACTTGG CAACAAGACC
CTCGATATGA TAACGCGGCT GTACGAGGCC TACGACCCTC AGGACACTGG GAAGCAGTTA
CAACTTCTGC AACAGTACAG GTGCAACGAC GCGCCTAGCG CAACCGACTT TGAAAACGCC
GCGAGGGCCT TGGTGCGGTA TCTGGCCCAA AAAGGCGTAA GGATAACACA GTTGGGCACC
CCTACCTTTA TCATAATAAA AAACGGGACT ATTGAGGTTG TCGTAGGCGC CCAGGTAGAC
CGCGTAGCCT CTCTTATTAG TCAGTAG
 
Protein sequence
MRPTIIFTVA IAVFVLLSIA IVYTRLGSPS VQTPSQLGEL PLPPWAMSFG NPNAPVTVIE 
LFDLHCPYCA WAHTQLDPLY KKLVGEGKLR LIFLDLIVHP DALLAHQYLH CAYRQLGNKT
LDMITRLYEA YDPQDTGKQL QLLQQYRCND APSATDFENA ARALVRYLAQ KGVRITQLGT
PTFIIIKNGT IEVVVGAQVD RVASLISQ