Gene Pars_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1710 
Symbol 
ID5054571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1544473 
End bp1545180 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content57% 
IMG OID640469253 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001153913 
Protein GI145591911 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.635275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.117581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAATCT ACACAATAGG CTACGGGGGG TGGATCTCTT CTCCGCACAT TGGCTACACA 
TCTCTGTATG TGAGAACTGA TGTGGGCATA TTGTTAGACG CCGGGGAGTG CACATATGCC
AGGTTGGCGC AGTGCGGCTT GTCGTGGCCC GACGTGGTGT TTATAAGCCA CAGACACGGC
GACCACATAT TGGGCCTCCC CACCTTTATG CTCATGGCCA GAAGAGTCGG GAAAAAGCTT
AGGGTGGTTG CCGATCGGGA GACGCTTGAG GCGGCGGCGG AGTTGGCGCG TCTGGTGGGG
ATAGAGAACT CTTTGCCATA TGTAGAGTTC GTGGAGGCCT CCGGGTCTGT GACAATAGGG
GAGACTAAGC TGACCTTCGC CCCCACCTCA CACCCAGTTC AAACCCTTGC CGTGAGGATA
GAACACGGGG GAAAATGTGC GGTGTACAGC TCCGACACCG CGCCATCTGA CAACATCGTA
GAGCTGGCCC GTGGTTGCGA CTTGTTGATA CACGAAGTCT CGGGAAACCC AGGGCAAGAG
GAGGAGGCGC ATAGAGTCGG CCACAGCACC ACGGCAGACG CCGTGGAGAT CGCGAAGAGG
GCTGGTGTGC GGATGCTCAT GCCGATACAC TTCTACGTAG ATCCCCCAGT GGTTCCCCCA
AGCGTCACGC TGATAATCCC GACGCCTTGT GGGAGGCTCC CTATATGA
 
Protein sequence
MEIYTIGYGG WISSPHIGYT SLYVRTDVGI LLDAGECTYA RLAQCGLSWP DVVFISHRHG 
DHILGLPTFM LMARRVGKKL RVVADRETLE AAAELARLVG IENSLPYVEF VEASGSVTIG
ETKLTFAPTS HPVQTLAVRI EHGGKCAVYS SDTAPSDNIV ELARGCDLLI HEVSGNPGQE
EEAHRVGHST TADAVEIAKR AGVRMLMPIH FYVDPPVVPP SVTLIIPTPC GRLPI