Gene Pars_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1702 
Symbol 
ID5054497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1536635 
End bp1537438 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content54% 
IMG OID640469245 
ProductABC transporter related 
Protein accessionYP_001153905 
Protein GI145591903 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.411618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTATTA ACCAATGCTT TCCAAGTGGC GTGTCTGAAA TTTTAAAAAT TGAGGGGGTA 
GAGGCGGGCT ACGGCAAATT CCACGTACTG TTTGGCGTAG ACCTAGAGGT TAAGGCCGGC
GAGATTGTGG TTCTTCTCGG CCCAAACGGC GCTGGCAAGT CGACGCTCTT AAACAGCGTA
GTGGGGATGG CCGACGTCTA CTCAGGGCGC ATTGTGCTGA TGGGACAAAA GATCACGGGT
AGGCCGCCCC ACGAGGTTAC GAAGATGGGC GTCGCCTACG TCATGCAGAG TCCTAACAAC
TTCGGCACGC CGAACATCTT CGGTGAGCTC ACCGTGTACG AAAACCTAGT CGCCGCCTCT
GCCGGGATTC CGAGAGGCGA AGCCCAGCGT AGGATAGAGG AGGTTTTTGA AATTTTTCCG
AAGCTGAGAG AGTTAAGGGA TAGGAAGGGC AAATTCTTGT CGGGCGGCGA AAGGCAGATG
CTTGCAATTG GGCTTGGGCT GATGAAAAAG CCCAAGTTGT TGATGCTTGA CGAGCCCACA
GCCGGCCTCG CTCCGAAGCT AGTAAGCGAC TTTTTCTTGG CCATAAGAGA TATTAGAGAT
AAGCTGGGCA TCTCTGTCCT GCTCGTAGAG CAGAACGCCA AGAAGGCGCT GGAAATAGGC
GACAGAGCCT ACGTCCTCGT AACAGGCCGC ATTAAGTACA GCGGGGACGC CAAGTCGCTG
AGCGAGGACA AACTCGCCGA GCTATTCCTC GGTGCAGAGA CAGGAGGCGA GACACGTACC
TATGCAGATA CCCCCCGGCG TTAG
 
Protein sequence
MFINQCFPSG VSEILKIEGV EAGYGKFHVL FGVDLEVKAG EIVVLLGPNG AGKSTLLNSV 
VGMADVYSGR IVLMGQKITG RPPHEVTKMG VAYVMQSPNN FGTPNIFGEL TVYENLVAAS
AGIPRGEAQR RIEEVFEIFP KLRELRDRKG KFLSGGERQM LAIGLGLMKK PKLLMLDEPT
AGLAPKLVSD FFLAIRDIRD KLGISVLLVE QNAKKALEIG DRAYVLVTGR IKYSGDAKSL
SEDKLAELFL GAETGGETRT YADTPRR