Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1678 |
Symbol | |
ID | 5054364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 1515065 |
End bp | 1515916 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640469219 |
Product | hypothetical protein |
Protein accession | YP_001153881 |
Protein GI | 145591879 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.844314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCGTGC CGAGAGTGCG CACTTATATC CCAGGGCTAG ACGAGATTTT GTACGGCGGC ATTCCCGAGA GAAGCATCGT GTTGCTAAGC GGAGGGCCGG GTACAGGGAA GTCGATTATG GCAAAGCAAT TCTTATATAA CGGCCTTAAG AGAGGCGAGG CCGGCGTCTT CGTGGCGTTG GAGGAACACC CCGTGGCCGT GCGCCGCAGT TTTAGGCACT TCGGCTGGGA CACCTCTCAG TATGAGCGGG AGGGGAAATT CGCCGTTGTC GATGCGTTTA CAGGCGGCGT AGGGGCCGCG GCCCAGAGGG AGAGGTACGT GGTGAAGCAA GTAGACGACG TCCACGAGCT TAGCGACGTT TTGCGGCAAG CCATCAAGGA GGTGGACGCC CGCCGGGTCG TAATTGACTC GGTATCCACC CTTTATCTAA CAAAGCCGGC GGTGGCCCGC GGCACTATAA TGACCCTGAA GCGGGTGATA GCAGGGCTTG GGTGCACGGC ATTTTTTGTG TCGCAGATCT CAGTTGGCGA GAGGGGCTTC GGCGGGCCGG GAGTAGAGCA TGCGGTCGAT GGCATAATTA GGCTTGACCT TGACGAGTTT GACGGGAGGC TCTACCGATC GGTAATAGTC TGGAAAATGA GAGACACGAA GCACTCCATG ATGCGCCACC CCATGGAAAT AAAGGACACC GGCATTGAGA TACTGTGGGA CAAGTTCTTG AAGGTTTCTG GGAGCGTGGT GAGGGTAGAG CCGCTGTCTA AAGAGGAGGT GGAGGCCATG AAGAGGGCGG TGGAGGAGGC GGAGAAGCGG CCCTCTCCTG TTCAGAGAAA GATTGAGGTT GAGGAGGAGT AG
|
Protein sequence | MVVPRVRTYI PGLDEILYGG IPERSIVLLS GGPGTGKSIM AKQFLYNGLK RGEAGVFVAL EEHPVAVRRS FRHFGWDTSQ YEREGKFAVV DAFTGGVGAA AQRERYVVKQ VDDVHELSDV LRQAIKEVDA RRVVIDSVST LYLTKPAVAR GTIMTLKRVI AGLGCTAFFV SQISVGERGF GGPGVEHAVD GIIRLDLDEF DGRLYRSVIV WKMRDTKHSM MRHPMEIKDT GIEILWDKFL KVSGSVVRVE PLSKEEVEAM KRAVEEAEKR PSPVQRKIEV EEE
|
| |