Gene Pars_1678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1678 
Symbol 
ID5054364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1515065 
End bp1515916 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content57% 
IMG OID640469219 
Producthypothetical protein 
Protein accessionYP_001153881 
Protein GI145591879 
COG category[T] Signal transduction mechanisms 
COG ID[COG0467] RecA-superfamily ATPases implicated in signal transduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.844314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGTGC CGAGAGTGCG CACTTATATC CCAGGGCTAG ACGAGATTTT GTACGGCGGC 
ATTCCCGAGA GAAGCATCGT GTTGCTAAGC GGAGGGCCGG GTACAGGGAA GTCGATTATG
GCAAAGCAAT TCTTATATAA CGGCCTTAAG AGAGGCGAGG CCGGCGTCTT CGTGGCGTTG
GAGGAACACC CCGTGGCCGT GCGCCGCAGT TTTAGGCACT TCGGCTGGGA CACCTCTCAG
TATGAGCGGG AGGGGAAATT CGCCGTTGTC GATGCGTTTA CAGGCGGCGT AGGGGCCGCG
GCCCAGAGGG AGAGGTACGT GGTGAAGCAA GTAGACGACG TCCACGAGCT TAGCGACGTT
TTGCGGCAAG CCATCAAGGA GGTGGACGCC CGCCGGGTCG TAATTGACTC GGTATCCACC
CTTTATCTAA CAAAGCCGGC GGTGGCCCGC GGCACTATAA TGACCCTGAA GCGGGTGATA
GCAGGGCTTG GGTGCACGGC ATTTTTTGTG TCGCAGATCT CAGTTGGCGA GAGGGGCTTC
GGCGGGCCGG GAGTAGAGCA TGCGGTCGAT GGCATAATTA GGCTTGACCT TGACGAGTTT
GACGGGAGGC TCTACCGATC GGTAATAGTC TGGAAAATGA GAGACACGAA GCACTCCATG
ATGCGCCACC CCATGGAAAT AAAGGACACC GGCATTGAGA TACTGTGGGA CAAGTTCTTG
AAGGTTTCTG GGAGCGTGGT GAGGGTAGAG CCGCTGTCTA AAGAGGAGGT GGAGGCCATG
AAGAGGGCGG TGGAGGAGGC GGAGAAGCGG CCCTCTCCTG TTCAGAGAAA GATTGAGGTT
GAGGAGGAGT AG
 
Protein sequence
MVVPRVRTYI PGLDEILYGG IPERSIVLLS GGPGTGKSIM AKQFLYNGLK RGEAGVFVAL 
EEHPVAVRRS FRHFGWDTSQ YEREGKFAVV DAFTGGVGAA AQRERYVVKQ VDDVHELSDV
LRQAIKEVDA RRVVIDSVST LYLTKPAVAR GTIMTLKRVI AGLGCTAFFV SQISVGERGF
GGPGVEHAVD GIIRLDLDEF DGRLYRSVIV WKMRDTKHSM MRHPMEIKDT GIEILWDKFL
KVSGSVVRVE PLSKEEVEAM KRAVEEAEKR PSPVQRKIEV EEE