Gene Pars_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1602 
Symbolrpl11p 
ID5054048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1449152 
End bp1449649 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content45% 
IMG OID640469143 
Product50S ribosomal protein L11P 
Protein accessionYP_001153808 
Protein GI145591806 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0080] Ribosomal protein L11 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.951942 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAGC GCGTAGTAAC TGTGCCATTA CAGGGTGGCA AGGTAGTTGC AAATCCCCAA 
TTCCAAGATA CCTTAAAGCA ATTGGGCATA GACCCCAACG TTGTGATTCA AAAAGTGCAG
GAGGAGCTTA AGAGGGTTGG GAAATACCCT GTGCAGAAGG TAGAACTTGA GGTGACCTCT
CCTACGAGGT ACGAGGTGAA GGTATACCTC CCGCCCATTG GCGATCTATT TCTTAGACTT
TTCGGAAAAG ACGTGGGCGC TCATGATTCA AGAAACGAAG TAATAGGCAA CCTATCATTT
GAACAACTCG TAGAGATCGC GATTTTGAAA AAAGACGAGC TTAAATCGAA GAGCTTGAAG
TCGGCAGTAA AACAACTATT AAGCACGTGC AAGGCAATGG GCATAACTGT AGACGGGAAG
CGGGCTGACG AGGTGTTAAA GGAGGTTGAT GGTGGGAAAT ACGACGAAAT CTTAAATAAG
TTCGAGAAAC AGTGGTAG
 
Protein sequence
MSKRVVTVPL QGGKVVANPQ FQDTLKQLGI DPNVVIQKVQ EELKRVGKYP VQKVELEVTS 
PTRYEVKVYL PPIGDLFLRL FGKDVGAHDS RNEVIGNLSF EQLVEIAILK KDELKSKSLK
SAVKQLLSTC KAMGITVDGK RADEVLKEVD GGKYDEILNK FEKQW