| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1601 |
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| Symbol | rpl1P |
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| ID | 5054141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | - |
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| Start bp | 1448482 |
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| End bp | 1449150 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640469142 |
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| Product | 50S ribosomal protein L1P |
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| Protein accession | YP_001153807 |
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| Protein GI | 145591805 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.670719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.978998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGTCT TGCTGAACAG GGACGTGCTG ACTTCTAAAA TAGCAGAGGC CCTCAAGGCG
GGGAAGCCCA GGAGGTTTAG GCAAAGCGTT GAGCTTATTG TAGTATTAAG AGAGTTGGAT
TTGTCAAAGC CTGAGAACCG TATTAATCTC TTGGTCGAGC TCCCCCATCC GCCCAAGGCG
AATAAGATAG CGGCCTTTGC CCATGGCGTG TTTGAGGTAA ATGCAAAAAA CGCAGGTGTA
GACGCGATAA TCACAAGAGA CCAGATAGAG TCCCTCTCAG GTAATAAGAG AGCAATTAGG
AAACTCGCAA AGCAGTACGA CTTCTTCATA GCGCCGCCCG ATCTCATGCC CCTACTAGGA
AGGGTGGTAG GTCCGATCTT CGGTCCGCGG GGAAAGATGC CAGAAGTCGT GCCGCCTAAC
GTCGATGTCA AATCTGTCGT GGAGAGGCTA AGGAGGTCTG TGAGAGTGAG GATAAGGAAT
GAGCCTGTAA TAAAGGTGAG GGTGGGGGCC GAGGGGCAAG ATCAAAAAGA AATTTTAGCA
AATATATTGA CCGTGTTAGA GGAGATTAAT AGGAAATTCT CATTGAAGCA GTATTTGAAA
GAGATCTATG TTAAGAAGAC GATGGGGCCT CCCATAAAAA TTAGAGCCGT CGAGGTCTTA
TCGCGTTGA
|
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| Protein sequence | MSVLLNRDVL TSKIAEALKA GKPRRFRQSV ELIVVLRELD LSKPENRINL LVELPHPPKA
NKIAAFAHGV FEVNAKNAGV DAIITRDQIE SLSGNKRAIR KLAKQYDFFI APPDLMPLLG
RVVGPIFGPR GKMPEVVPPN VDVKSVVERL RRSVRVRIRN EPVIKVRVGA EGQDQKEILA
NILTVLEEIN RKFSLKQYLK EIYVKKTMGP PIKIRAVEVL SR
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