Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1600 |
Symbol | rplP0 |
ID | 5054122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 1447405 |
End bp | 1448439 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640469141 |
Product | acidic ribosomal protein P0 |
Protein accession | YP_001153806 |
Protein GI | 145591804 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.127229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGCTA TTGGCAAGAG AAAATACGTA AGAGAAAAGC CTTACCCCCC GCGGAAGGTT AAGACAGTTA ATGAGGCTGT CGAGTTGTTG AAGAAGTATC CGTATGTCTT CATATTCGAT CTCCATGGGC TTTCGGCTAG AGTATTAAAT GAGTATAGAT ACCGAATAAG GCCTTACGGC GTTATCAAGA TCATTAAACC TACTCTGTTT AAAATAGCGT TTTCCAAGGT TTATGGAGGT ATATCTACCG ACATCGCCGA GAAGATCAGA GGGGAGATAG GATTTCTATT CACCGACATC AACCCGGCAG AGATGATAAA AATCGTAGCT GAGAAGAGCG TTAGGAGGGC GGCAAAGCCT GGGGATAAGG CGCCTTTTGA CATAGTAGTT CCGGCTGGGC CTACCAACGC ATCGCCCGGG CCCATTATCT CAAAATTTGG AAAGTTGAAG ATACCTACAA GAGTTCAGGA GGGTAAGATA TGGATTGCAA AGGACACTGT CGTCGCCAAG GCGGGCCAGG AAATTACGGC TGAGATAGCC GAAGTGCTGA GAGTGGTTGG AATAGAGCCC ATATTCGAGC AGTTAAGACT CGTCGGGGTA TTGTGGAAAG GTAAACGGTA TGTAGACATC TCGGAGTTGG TGATAGACGT CTCGAAGTAC AGAGAGCTCT TCGAAGTTGC GGCCGCGCAC GCCAGGAATT TGGCGCTCAA CGTGGTATAC CCGACAAGAG AAGTGTTACA GGTGGTTCTG CCCGTTGCCC ACATGAGAGC TGTGGCGCTC GCCGCGAAGC TGGGCGTGGT GACGAGGGAG ACTCTGCCAG TGTTGCTAAG CAGAGCAGTG GCGGAGGCAA ACGCCTTGGC GGCCGCAGTT GCGGCAAAGG CGCCCGACCT TGGTATTACT GTAGCGGCTC CGCAAACCGT TGCTCAACAG CCCGCCCAGC ATGCTGAGGC TCCAAAAGAG GAGACGAAGG AGGAGGAGAA GAAAGAGGGG CCAAGCGAAG AGGAGATAGC GGGCTCGCTG GCTTCTCTGT TCTAA
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Protein sequence | MLAIGKRKYV REKPYPPRKV KTVNEAVELL KKYPYVFIFD LHGLSARVLN EYRYRIRPYG VIKIIKPTLF KIAFSKVYGG ISTDIAEKIR GEIGFLFTDI NPAEMIKIVA EKSVRRAAKP GDKAPFDIVV PAGPTNASPG PIISKFGKLK IPTRVQEGKI WIAKDTVVAK AGQEITAEIA EVLRVVGIEP IFEQLRLVGV LWKGKRYVDI SELVIDVSKY RELFEVAAAH ARNLALNVVY PTREVLQVVL PVAHMRAVAL AAKLGVVTRE TLPVLLSRAV AEANALAAAV AAKAPDLGIT VAAPQTVAQQ PAQHAEAPKE ETKEEEKKEG PSEEEIAGSL ASLF
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