Gene Pars_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1578 
Symbol 
ID5055628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1427163 
End bp1427771 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content55% 
IMG OID640469119 
Producthydrolase 
Protein accessionYP_001153784 
Protein GI145591782 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000487041 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACTTTA TAGTAAGCTT CTGGGGCCTA TTGGTGGAGA GGGTGGACTT CTGGGAGGCT 
TGGCGGGGGT TAGTACCTCA CGAAACAGTT GAGAAGGTGG CGTATCTGGT TAGTCAAATA
AACTCCGCAG GATACGAGGT CCCACTGCGG GTGCTGGTGA GGATATTTGC CCACGAAACT
GGGGCCGACA CGTCGGCGTT GGGAAGCAAG TACGTGGAGA GGGTTAAGAC GCTGATGAAG
CCACGGCGTT GTGTCGGCGA ATTTATCACA CAGCTTAAGA AAAGGGGAAA GGTGGCGGTT
CTGTCTAACA CGCCTTGCCG GTGCTTTGTG AAGGAGTTTC TAACAGAGGC TGGTCTAGAG
GTGGATATGG TCTTGACCTC AGACGTATTG CTGAGGCGGA AACCGCTTAA GTCCGTGTTC
AAATACGCCT TGGCGAAATT GGGGTCCCGG CCGTACGAAG CCGTTTATTT TGGCGACGGA
GAAGAGGATC TGGGAGCCCT TGCCGTGGGG CTGTTCACTG TGACGATAGG GTTCGAGGGG
GGCCACCTCA GTTTTCCCAG CCTCTGCGAC GCGTCGGAAT GGGTCGACCG GCAGTTCCCA
CAAAAATAA
 
Protein sequence
MNFIVSFWGL LVERVDFWEA WRGLVPHETV EKVAYLVSQI NSAGYEVPLR VLVRIFAHET 
GADTSALGSK YVERVKTLMK PRRCVGEFIT QLKKRGKVAV LSNTPCRCFV KEFLTEAGLE
VDMVLTSDVL LRRKPLKSVF KYALAKLGSR PYEAVYFGDG EEDLGALAVG LFTVTIGFEG
GHLSFPSLCD ASEWVDRQFP QK