Gene Pars_1502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1502 
Symbol 
ID5054598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1361012 
End bp1361755 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content61% 
IMG OID640469044 
ProductABC transporter related 
Protein accessionYP_001153710 
Protein GI145591708 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.202973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCTG GGCCATTGTT AAGGGCTGAG GGGGTTGTAA AGAAGTTCGG CGGCTTAACC 
GCTCTGGACG GCGCCACCGT CGAGGTCAAG GCCGGTTTTT TCACCCTCCT CGCGGGGCCC
AACGGATCTG GCAAGACCAC CCTCATAAAC GTGATAACAG GTTTGCTGAC GGCGGATGGG
GGGAGGATTT TGTACGAGGG CCGAGACATC ACTAAGCTCC CCCCACACGA GAGGAGGCGT
CTGGGGATAT TTCGCACCTT CCAGACGCCG AGGCTGGCCC AAAGGCTTAC CGTACTGGAC
AACGTGGTGG TGGGCGCGCT GGAAAGGGAG AGGCCGGCTC TGGGCCGCTG GTACGGGAGG
GAGAGGGAGC TGGAGGACTT GGCGTTTAGG GCGTTGAAGC TCGTGAACCT TGACCACATG
TGGGATAGGC CGGCGGGGGA GCTCAGCGGT GGTCAGATGA AGTTGCTGGA GCTCGCGAGG
CTTATAGTAT CGGGGGCCCG CGTCATGCTC CTCGACGAGC CTGCCGCCGG GCTGAACCCG
GCGTTGGCGA AGGAGCTGTT TAAGCACTTA AAAAACATTG CGAGTAGCGG CGTCGCCCTG
CTGGTGGTGG AGCACCGGCT CGACATAGCG GTGGACTACG CGGACTACGC GTACTTCATG
CACGAGGGGA AGGTGGTGGT CGAGGGCTCT CCGAGAGAGG TATTTGAAAA CCCGCTGGTG
GCGCAGATAT ACCTGGGGGG ATGA
 
Protein sequence
MRSGPLLRAE GVVKKFGGLT ALDGATVEVK AGFFTLLAGP NGSGKTTLIN VITGLLTADG 
GRILYEGRDI TKLPPHERRR LGIFRTFQTP RLAQRLTVLD NVVVGALERE RPALGRWYGR
ERELEDLAFR ALKLVNLDHM WDRPAGELSG GQMKLLELAR LIVSGARVML LDEPAAGLNP
ALAKELFKHL KNIASSGVAL LVVEHRLDIA VDYADYAYFM HEGKVVVEGS PREVFENPLV
AQIYLGG