Gene Pars_1498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1498 
Symbol 
ID5054151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1357350 
End bp1358177 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content60% 
IMG OID640469040 
Productribulose-1,5-biphosphate synthetase 
Protein accessionYP_001153706 
Protein GI145591704 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1635] Flavoprotein involved in thiazole biosynthesis 
TIGRFAM ID[TIGR00292] thiazole biosynthesis enzyme 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.16629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGACAA ATAAAATTAT TAATGGAAAC ATACTGGCAT TTATGGAACT GAAAATAGGC 
AGGGCCATAA TCAAGAAGGG CCTTGAAGTA CTGTACGAAT ACAGCGACGT GGACGTCGCC
ATCGTCGGCG CGGGGCCGTC GGGGCTCACC GCGGCGCGCT ACTTAGCCGA AAAGGGCTTC
AAGGTGCTCG TCTTTGAGAG GCGTTTCTCC TTCGGAGGGG GGATAGGCCC AGGGGGTAAC
ATGTTGCCCA GCATCGTGGT GCAGGAAGAG GCCTTGCCCA TTCTCAGAGA TTTCAAGGTG
AGGTACCAGC CGGCCGGGGA CGGGCTGTAC ACCGTCGACC CCGCGGAGCT GATTGCGAAG
CTCGCCGCGG GGGCAATAGA CGCAGGGGCC AAGATAATAC TCGGCGTCCA CGTCGACGAC
GTTATTTTCA GAGGCGACCC ACCCAGGGTG GCGGGGCTCT TGTGGATATG GACACCCATC
CAGATGTCCG GAATGCACGT GGACCCCCTC TACACCATGG CCAAGGCGGT GATAGACGCC
ACGGGCCACG ACGCCGAGGT GATATCCGTG GCCGCGCGGA AGGTGCCGGA GCTGGGCATC
CAGCTCCCCG GCGAGAAGTC GGCTTGGTCA GAGGTTTCCG AGAAGCTGGT GGTTGAGTAC
ACGGGCAAGG TGGCGCCGGG GCTGTACGTA ACAGGCATGG CAGTAGCCGC CGTCCACGGC
CTCCCGAGGA TGGGCCCCAT ATTCGGAGGA ATGATGCTCT CCGGCAAGAA AATCGCCGAA
ATAGTAGCAA AGGACCTGGC AGAGGAGGCC TATGCCCTTC GAGCTTAA
 
Protein sequence
MKTNKIINGN ILAFMELKIG RAIIKKGLEV LYEYSDVDVA IVGAGPSGLT AARYLAEKGF 
KVLVFERRFS FGGGIGPGGN MLPSIVVQEE ALPILRDFKV RYQPAGDGLY TVDPAELIAK
LAAGAIDAGA KIILGVHVDD VIFRGDPPRV AGLLWIWTPI QMSGMHVDPL YTMAKAVIDA
TGHDAEVISV AARKVPELGI QLPGEKSAWS EVSEKLVVEY TGKVAPGLYV TGMAVAAVHG
LPRMGPIFGG MMLSGKKIAE IVAKDLAEEA YALRA