Gene Pars_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1488 
Symbol 
ID5055598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1347286 
End bp1347714 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content47% 
IMG OID640469030 
Productsignal-transduction protein 
Protein accessionYP_001153697 
Protein GI145591695 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.661715 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAG AAGTGGTAGC ACGCAAACCG CCAATAACCG CTACGCCTGA CGCTAGGATT 
AAAGACATTG CTAAAATTAT GGCAGAGAGA AAAATTGGAC TTGTTGTAAT AGTAGACAAA
AACCAACCCG ACTACGCCGT AGGTGTAGTT TCCGAAAAAG ATATTGTAAA AGCCGTGGCC
AACAACCTAG ACTTGAACAG GCCCGTGAAG GAAATTATGA CCTCACCTGT CATAACAGTA
GAGGGGAGCG AGCCTGTTTG GACTGTTGCA AGAATTATGC GCCAGCACAA TATCAGACAC
GTAGTTGTGA CACGCGGCGG TAAGCTCTAC GGCGTTATTT CAATAAGAGA CCTCGTAGGA
GAGGAGTCTG TGTTGCGGAG TTTGGTCGAG TACGGCGAAC CAGAGGAGCA TAGGCCATCT
GCTGATTAA
 
Protein sequence
MKAEVVARKP PITATPDARI KDIAKIMAER KIGLVVIVDK NQPDYAVGVV SEKDIVKAVA 
NNLDLNRPVK EIMTSPVITV EGSEPVWTVA RIMRQHNIRH VVVTRGGKLY GVISIRDLVG
EESVLRSLVE YGEPEEHRPS AD