Gene Pars_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1425 
Symbol 
ID5055697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1285486 
End bp1285650 
Gene Length165 bp 
Protein Length54 aa 
Translation table11 
GC content47% 
IMG OID640468966 
Product30S ribosomal protein S30e 
Protein accessionYP_001153635 
Protein GI145591633 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG4919] Ribosomal protein S30 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0292101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCAC ATGGATCGCT GACAAAGGCA GGCAAGGTAA GGAACCAGAC ACCGAAAATA 
CCGGCTAAGC CCAAGAAGAA TCTAACTCCA AGAAGGAGAA ATCTAAGGAA CTACAAGAGA
AAGATCTTAT ACGCCTCTTC ACAAGCCTCA GCAACAGAGG CATAG
 
Protein sequence
MPSHGSLTKA GKVRNQTPKI PAKPKKNLTP RRRNLRNYKR KILYASSQAS ATEA