Gene Pars_1410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1410 
Symbol 
ID5054592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1272044 
End bp1272562 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content64% 
IMG OID640468953 
ProductpaREP11 
Protein accessionYP_001153622 
Protein GI145591620 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.345052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.266454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGCGA CGGCGGGGCT GAGGAACATT CTTGTCCACG GATACGCGGC GGTAGAGCCG 
GAGAAGGTGG TGGAGTGCTC CAAGCGGGTT GGGCAAGACG CCTTGAGAAT AGCCGAGGCG
ATCATAAGCG CGCTGGAGGG ACGGGGCATC GACCCGTTTG AGGACGAGCC AGTTGCGAAG
ATTAGGGACG TGCTGAGTGG AAGGGTGAGG TTGGCCTACC TCTTCGGGGG GAGGGCCAAG
GGGTACAGCC TCAAGGGGGA CTACGACGTC GCAGTGTACG TGGAGGGCGG TTGCGACCTT
TACGAGCTCG GCCTTCTCCA GGTGGACCTC TCGGAGGCTT TGGGGGATGG GCGGGTGGAC
GTGGTCTGTC TCAACTCGGC GCCGCCGGAG TTAGTCCTAG AGGCGCTCTC CGGCGTCCCC
GTAATAGACG ACCCGGCGCT GAGGGCGGAG CTCTACGCGA GGGCGCTGGC CGAGCTAAAC
GACGTGGAGA TAACCACAAG ACGCGCCTAC CGGCGGTAG
 
Protein sequence
MKATAGLRNI LVHGYAAVEP EKVVECSKRV GQDALRIAEA IISALEGRGI DPFEDEPVAK 
IRDVLSGRVR LAYLFGGRAK GYSLKGDYDV AVYVEGGCDL YELGLLQVDL SEALGDGRVD
VVCLNSAPPE LVLEALSGVP VIDDPALRAE LYARALAELN DVEITTRRAY RR