Gene Pars_1405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1405 
Symbol 
ID5055976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1268283 
End bp1269371 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content56% 
IMG OID640468948 
Productaminotransferase, class I and II 
Protein accessionYP_001153617 
Protein GI145591615 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.269129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.550876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATATTTC CCGAGTTCTG CCTAGAGAGG TGGCAGTCGC TGAGGGATTG GAGAGCGCGG 
TATAACCTAT CTGAAAGCGG CGTTGAGCCT CTCACATATG AGGAGTTGGT GGAGTTGGTT
GGGGTGCCCC GCGGGGTGGT GCTTGGCTAC GGGATGACGA AGGGTCTTCC GAGACTTAGG
GAGGAGTTGG CGGTGATGCA TGGCGTTGGG CCAGAGGAGG TTTTAGTCAC TTCGGGAGGC
GCCGAGGCGA ACTTTGTAAC TACTCTCGCT TTGGTGGGGC CGGGGGACCG CGCGGTAGTG
GTTATGCCTA CCTATATGCA GATACCTGGA ATACTCCGGG GGATAGGCGC TGTGGTGGAT
AAGACGTGGA TAAAATACGG CGAGGGGCTA GACGAGGAGG AGCTGAAGAG AAAAGTGGCT
AGAGGGGTAA AGGCGGTGTT TGTGACAAAC CCCAACAATC CCACCGGATA CGTCCTCAGC
GAAGGCGAGA GGAAGTTGCT AGTAGACTTG GCCGAGGATG CAGGGGCGTA CCTCGTGGTT
GACGAGGTGT ACAGAGGACT TGAACACGAG GGCCCCGAGA CCCCCACCTT CGCCAAGCAC
TACGACAAGG CTGTGGTCAC CGGCTCTCTT TCAAAGACGT ATGGCCTACC GGGGCTTAGA
ATTGGCTGGG TAGTGGGGCC GGAGGATGTG GTGAACGGGG CCTGGGCGGT GAAGGACTAC
ACGACTATAT CTCCCCCCCT GCTTGACCAA CACCTCGCCG TAGCCGTGTT GGAGAAGAGG
GACTACTTCA TAAACAGGTC TAGAACCATC GTTAGGCGCA ATTTTGCCAT CTTCGGAGAG
TACGTCAAGG CTAGGCCATA TGTCAAGTGG TGGAATACTA AGGCGGCGGC GTTTAGCCAC
ATCTATGTAG GAGGCGACAC CTTAAAACTC GCCGAGGAGA TTTTCGAAGA GACCGGCGTG
TTGGTAAACC CCGGGGAGTG CTTTGAGATG AAGGGATACC TCAGAGTGGG TCTCGGGTGG
GCAGACGAGA ATAGGCTAAG AGAGGCCCTG GACCTCTTCT TCTGGGCCTT AGATAAGAAG
CGCCCCTAG
 
Protein sequence
MIFPEFCLER WQSLRDWRAR YNLSESGVEP LTYEELVELV GVPRGVVLGY GMTKGLPRLR 
EELAVMHGVG PEEVLVTSGG AEANFVTTLA LVGPGDRAVV VMPTYMQIPG ILRGIGAVVD
KTWIKYGEGL DEEELKRKVA RGVKAVFVTN PNNPTGYVLS EGERKLLVDL AEDAGAYLVV
DEVYRGLEHE GPETPTFAKH YDKAVVTGSL SKTYGLPGLR IGWVVGPEDV VNGAWAVKDY
TTISPPLLDQ HLAVAVLEKR DYFINRSRTI VRRNFAIFGE YVKARPYVKW WNTKAAAFSH
IYVGGDTLKL AEEIFEETGV LVNPGECFEM KGYLRVGLGW ADENRLREAL DLFFWALDKK
RP