Gene Pars_1396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1396 
Symbol 
ID5056131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1259713 
End bp1260651 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content62% 
IMG OID640468939 
ProductFis family transcriptional regulator 
Protein accessionYP_001153608 
Protein GI145591606 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.358472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.485282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGA GGAAGACAGA GCGGGACGAC CTCTCATCGC TGGAGGGGGT GGGGCCGAAG 
ACGTTGGAGA GGCTTAGGGA GCTGGGCGTA GTGTCGGTGG AGCACCTCGC CGAGTTCACG
GTGGAGGAGC TTGTGGAGGC CGGCGTGGAG TACGACAGAG CTGTGAAGAT AATCCAGCAA
GCCTTGGCGA AGGCCGGCGG CGTTAGGGCG GCCACGGTGA AGGAGCTGAG GGCGAGGCAG
TACAAGACGT TTAAGACGGG GGTGGCAGAC TTCGACGAGA AGACGCCGTG GAGGGGGATT
AGGGAGGGCT TTATCTACGA GTTCGCCGGG GAGTTCGGCG CGGGGAAGTC AATGCTGGCG
CACCAGCTCT CAGTCGCCGC GCTTAAAGAG GGGTTCACGG GGAGGGTGGT GTACATAGAC
ACGGAGGGGA CCTTCAGCCA CGAGCTGGTG GAGGCCGTGG CCAAGAGGTT TGAGGCCGAC
ATCGACAAGG TGGGGGACTC CGTATACGTA TACCAGCCGG CCAACGTGGT CCAGCTGGAG
CAGATCGTGA AGTTCGAGAT CCCCAAGCAC GTCGCTGAGG GCTGCCGCCT CGTAGTTGTG
GATACCATCA CGGCGCTTTA CCGCGCCGAG TTTGTGGGTA GGGAGCACCT AGCCGCTAGG
CAGCAGAGGA TCCACTACCT CGTAGACTGG CTGAGGCGGC ACGCGAGGAC TTTCGGCGTC
ACGTCTATCC TGACGAACCA GGTGATGGAC GTACCTGAGG TCTTCGCCTC TAAGAGGCCG
GCGGGGGGAA ACGTCATCGC CCACGCGGTA AACGCCAGGT TTATGATGAG CCGGCCCAAC
AAGATGAGGC CGGAGGGCCG TATGTGGCCG CTGGACGTCC CAGGCATGGC CCCGGACGTG
GAGATCGCCT ACCAAATTTC AAGCGACGGG CTGCACTGA
 
Protein sequence
MSRRKTERDD LSSLEGVGPK TLERLRELGV VSVEHLAEFT VEELVEAGVE YDRAVKIIQQ 
ALAKAGGVRA ATVKELRARQ YKTFKTGVAD FDEKTPWRGI REGFIYEFAG EFGAGKSMLA
HQLSVAALKE GFTGRVVYID TEGTFSHELV EAVAKRFEAD IDKVGDSVYV YQPANVVQLE
QIVKFEIPKH VAEGCRLVVV DTITALYRAE FVGREHLAAR QQRIHYLVDW LRRHARTFGV
TSILTNQVMD VPEVFASKRP AGGNVIAHAV NARFMMSRPN KMRPEGRMWP LDVPGMAPDV
EIAYQISSDG LH