Gene Pars_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1374 
Symbol 
ID5054068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1235379 
End bp1235888 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content53% 
IMG OID640468919 
Producthypothetical protein 
Protein accessionYP_001153588 
Protein GI145591586 
COG category[S] Function unknown 
COG ID[COG2512] Uncharacterized membrane-associated protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.508752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0176648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGAGG ACATCTCCCC AAGGCCTGAG AGAGTAGAGA TGAACAAGAC AAGTCTCTAC 
CTCTATTTAA CCCGGCGACG TGAAAGTCGC TTATTTACAC TTACAGTCAC GCCGTCCCCC
TCGCCGCCTC CCTCCACGAC TCCGACGCCG ACATCTCTGC CCACAACAGC AACGCCTCCG
CCGTCAACTG CCACTTCGAC CCAGCCACAT GCCCCGGGGA CGGAGTTTTT AATTGCCGCC
GCGTTAATTG TAGTCGCGGC AATTACAGCT TCATTACTGT TTAGGAAAAG GGGGAGGGGC
GACTGCGCCG ATTTAAACGA AACTGATAAG GCAATAATCA ACGCGCTAAT TGACAGGGGA
GGCGTCGCCG AAAGGACAGA GCTCCAAGAG GCGCTGGACC TCCCGAAAAC CACTCTCCAC
AGACATCTAC ACAAACTGGC AAAATACGGC TATATAAAGC TGGAACAATT AGGCGGCAGG
CAGAGAGTAA AGCTACTCAG GAAGTGCTAG
 
Protein sequence
MIEDISPRPE RVEMNKTSLY LYLTRRRESR LFTLTVTPSP SPPPSTTPTP TSLPTTATPP 
PSTATSTQPH APGTEFLIAA ALIVVAAITA SLLFRKRGRG DCADLNETDK AIINALIDRG
GVAERTELQE ALDLPKTTLH RHLHKLAKYG YIKLEQLGGR QRVKLLRKC