Gene Pars_1346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1346 
Symbol 
ID5054445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1210648 
End bp1211424 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content53% 
IMG OID640468892 
Productmethyltransferase type 11 
Protein accessionYP_001153561 
Protein GI145591559 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0961707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGA TGGAGGCGTT TTTCGACGAC GTGTATCTCG AGTTTATGCA GTACTATAGG 
GGGGAGGAGG CGTCTAGGGC GGAGGCTGTT TTTGTGGCGA AGGCGTTGGG CGTTAGGCCT
GGGGTAAGGG TGCTGGACGT TGCTTGCGGC CATGGGCGAC ATATGGCGTA TATGCCTAGG
GATACTGTAG TGGGCGTAGA CATAAACCTG GCCTACTTAA AAATAGCGAA GAAACACGGC
GATGTTGTGC AGGCTGATGT GAGAAGTTTG CCTTTTAGAA GGGGTGCTTT CCACGGGGCC
TACATAATGC ACTCAACTTT TGGCATGTTC GGTGACGAGG TGGATATGGA GATCTTGACG
TGGTTGTCGG GCGTGGTGAA GCAGGGAGGG CGCTTGGTGG TAGATGTGGC AAATAAAGAC
AAGGTCGAGA GCGTATACGC CTCGCTTGGA GATGTGTGGA ATTTTTGGAT CTCTGCGGGT
CCTTTTAGGG TCTTGAGCAC TGCTCATTAC AACCCAGTAG CCTCGAGGAT TAGGGAGACG
AGGCTTATAT ACAAGGGCGG GAGGTTTCTG GGGGAGCGGG TTCTTGAGCT TAGGCTATAC
GGACTTGGGG AGATGAGGCT TATGTTAAGC AGTGTTGGGT TCGTCATAGA AAATGTCTAC
GGCGATTTTG ACGGACAGGC GTACTCCAAG AGCTCGGACC GCCTTATCGT GGTGGCGGTG
AAGACGGGAG GCGTACCTAG AAGCTTGAAG CAGGCAATGG ACTGGGCTGA TCTATGA
 
Protein sequence
MSWMEAFFDD VYLEFMQYYR GEEASRAEAV FVAKALGVRP GVRVLDVACG HGRHMAYMPR 
DTVVGVDINL AYLKIAKKHG DVVQADVRSL PFRRGAFHGA YIMHSTFGMF GDEVDMEILT
WLSGVVKQGG RLVVDVANKD KVESVYASLG DVWNFWISAG PFRVLSTAHY NPVASRIRET
RLIYKGGRFL GERVLELRLY GLGEMRLMLS SVGFVIENVY GDFDGQAYSK SSDRLIVVAV
KTGGVPRSLK QAMDWADL