Gene Pars_1294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1294 
Symbol 
ID5054471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1169372 
End bp1170019 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content56% 
IMG OID640468840 
ProductABC transporter related 
Protein accessionYP_001153509 
Protein GI145591507 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.471861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATTC GTCTAGAGGA CGTTTGGCTT GATATAGACG GGAGGGCCGT GTTGAGGGGG 
GTCACCGGCG AGCTCAAGGG CTTGAATATC TTGATAGGCC CCAACGGCTC GGGAAAGACT
GTCCTCCTCC ACGCAATAGC GGGGATATTA AAACCAAAAC GCGGAAGAAT CGACGTGGAG
GGGGTCACGT CGATAATGTT CCAAGATCCC GAGGTACACT TCGTGGCGGG GACGGTGTTG
GAAAACGCCG TCTTGTGGGG CAGAGGCCGA TCCGACGAGA GGGAAATTAA GGAGATAGCC
AAGGAGCTCG GCATAGCGGA TCTCCTTAAT CGCTCCCCGT TTCATTTAAG CTGGGGCCAG
AGGAAGCTGT CGGCGCTCCT CTGCGCGCTT GCGGGGAAGC CCGACGTCCT CCTACTCGAC
GAGCTTCCGG AGGGTCTCTC GCCCAGAGCG CTCAAGACGG CCATCTCGGC GGCTACATCC
ACGGCTAAAA CTGTGGTGAT GACCTCTCAC CAGTTCCTCG AGCTGGGTTG GAACCTCCAC
TTTCTGGCAG ATGGCACCCT ATACTCTGGC GAAGAGGCCT TGGCAAAAGC TAGTGAGTAC
GAATACGACA AATGCAGATG TCCCCTATTT GCAGTTGAAG AACGCTAA
 
Protein sequence
MAIRLEDVWL DIDGRAVLRG VTGELKGLNI LIGPNGSGKT VLLHAIAGIL KPKRGRIDVE 
GVTSIMFQDP EVHFVAGTVL ENAVLWGRGR SDEREIKEIA KELGIADLLN RSPFHLSWGQ
RKLSALLCAL AGKPDVLLLD ELPEGLSPRA LKTAISAATS TAKTVVMTSH QFLELGWNLH
FLADGTLYSG EEALAKASEY EYDKCRCPLF AVEER