Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1294 |
Symbol | |
ID | 5054471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 1169372 |
End bp | 1170019 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640468840 |
Product | ABC transporter related |
Protein accession | YP_001153509 |
Protein GI | 145591507 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.471861 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATTC GTCTAGAGGA CGTTTGGCTT GATATAGACG GGAGGGCCGT GTTGAGGGGG GTCACCGGCG AGCTCAAGGG CTTGAATATC TTGATAGGCC CCAACGGCTC GGGAAAGACT GTCCTCCTCC ACGCAATAGC GGGGATATTA AAACCAAAAC GCGGAAGAAT CGACGTGGAG GGGGTCACGT CGATAATGTT CCAAGATCCC GAGGTACACT TCGTGGCGGG GACGGTGTTG GAAAACGCCG TCTTGTGGGG CAGAGGCCGA TCCGACGAGA GGGAAATTAA GGAGATAGCC AAGGAGCTCG GCATAGCGGA TCTCCTTAAT CGCTCCCCGT TTCATTTAAG CTGGGGCCAG AGGAAGCTGT CGGCGCTCCT CTGCGCGCTT GCGGGGAAGC CCGACGTCCT CCTACTCGAC GAGCTTCCGG AGGGTCTCTC GCCCAGAGCG CTCAAGACGG CCATCTCGGC GGCTACATCC ACGGCTAAAA CTGTGGTGAT GACCTCTCAC CAGTTCCTCG AGCTGGGTTG GAACCTCCAC TTTCTGGCAG ATGGCACCCT ATACTCTGGC GAAGAGGCCT TGGCAAAAGC TAGTGAGTAC GAATACGACA AATGCAGATG TCCCCTATTT GCAGTTGAAG AACGCTAA
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Protein sequence | MAIRLEDVWL DIDGRAVLRG VTGELKGLNI LIGPNGSGKT VLLHAIAGIL KPKRGRIDVE GVTSIMFQDP EVHFVAGTVL ENAVLWGRGR SDEREIKEIA KELGIADLLN RSPFHLSWGQ RKLSALLCAL AGKPDVLLLD ELPEGLSPRA LKTAISAATS TAKTVVMTSH QFLELGWNLH FLADGTLYSG EEALAKASEY EYDKCRCPLF AVEER
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