| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1255 |
|---|
| Symbol | |
|---|
| ID | 5055791 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 1134028 |
|---|
| End bp | 1135524 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640468798 |
|---|
| Product | restriction endonuclease |
|---|
| Protein accession | YP_001153471 |
|---|
| Protein GI | 145591469 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.185862 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.543832 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGTCC TGGATATCTT AACGTCTCTC AGCTCTGAAG AGTTTGAAAA ATATGTAGCT
GACTATGTGC TACCGGTCTT GGGCTTAAGA GTTCACAACG TTGTGGGTGG GCCGTACGAC
AGAGGTTGTG ACATAATTGC TGAGGACACG CGGTTTGGGA GTAGGGTATG CGTCCAGGTT
AAGAGGTACT CGCCGGAGAG GAAAGTGACG GAGAAAGATG TCAGAAACGT TTTGTTCGGC
ATGGAGCAAC ACCGCTGTGA CCGCGGGCTC ATTGTCACCA CCTCTGATCT CAACGGACCT
GCGCTGAGCT TAGCGAGGCA GTACCGGATA GACTACATAA ACGGCGCGAG GCTTGCCAGG
ATGGTGGAGG AGCAGTTAAT TCCCCTGGTG ATGCCCAAGG CCGTGGTCGC AGCGGTGCAT
CAAGAAGAGG GGAGTCATGA GGCCGTGGAG AGGGAGGTGA GGGATGACGG GGTGTTTATC
CCGCTGGGAG TCACCAACGC CGTGGAGGTT GCAAGGGCCT ATCTGAAGTC CAAGGGGGCG
CTACATCCTC AGCTCGGGGG CGTATCCGCA CTTTTGAAAA GGCTCTACGT GTTTAAAGCC
AAGGCGAGCT ACAAGCTGGG GAGGAGGAGG TCGGAGGAGG CCGTAATTTC GGTGGACGCA
GAGGGTGAGG TATACGAGGG CGTGCCGCCT CTGATCAATA CGGTTAACTT CTATGTGGAG
TACGAGACGA GCAGGGAGGA CTACTACTCG GCCCGGGAAA TCGCCATCCG CTATATCACA
AGTAGAATAG TCCCGGAGGG GGCGCAAGAT ATCAAGATCC AGCTCAAGAA CCACGCCCTT
GCGTGGGTTG CGGCGCTGTA CGCCATACGC TTTAAGGTGG GGCTCGTTGA CGTGGTTGTA
CACGTCGATA AGAAGGGAAG AGTTGTGAAA ATGGAGCGAG GCCGCCTTAC CGATGACTTA
GTGAGGGGAG CGTACGGCGG CGAGGTGGTG AGAGGCGATG GTTACAAGGT GAGGCTAGAT
CAGGGCAATT TCGTGGAGGA GCTAAAGCTC AACGAGTTTG GAGAGGTTGT GGCAAGGGCT
CGGGCAGTCA AGGAGAGCTA CGCCGTGGAG GTGGCATCTA AGTTTTTCGG CATTGCCGGG
GAGGACGTGA GGTATAAACG CGAAGGCGGC GCGGTAAAAG TAGACATTTT TCTAAACGGC
CACCACCACC TCGCCAAAGT GGACGAAAAC GGCGAGGTGG TTGACTACGT GGTGGTGCCC
GACGCAGAAA TTTACGAAGG CTTCGAAAAG GGGTATAACA TAAGGATGAG GGCGCTCATT
GTGAAGACAG TGGAAGATGG CGAAGAAGTG GTGCGGGTTG TGACAAGCGA AGGCGTAGTT
GACGAAAAAA GAGCGAAGAG GTCTCTTCTA AGGAAAATCG GGAGCAGTCT AGCGGGGCTT
GTCAAGAAGT CGGAGGAGTA CTCAATAGAT ACGGCTGACC CCCTCAACTT AATCTAG
|
|---|
| Protein sequence | MGVLDILTSL SSEEFEKYVA DYVLPVLGLR VHNVVGGPYD RGCDIIAEDT RFGSRVCVQV
KRYSPERKVT EKDVRNVLFG MEQHRCDRGL IVTTSDLNGP ALSLARQYRI DYINGARLAR
MVEEQLIPLV MPKAVVAAVH QEEGSHEAVE REVRDDGVFI PLGVTNAVEV ARAYLKSKGA
LHPQLGGVSA LLKRLYVFKA KASYKLGRRR SEEAVISVDA EGEVYEGVPP LINTVNFYVE
YETSREDYYS AREIAIRYIT SRIVPEGAQD IKIQLKNHAL AWVAALYAIR FKVGLVDVVV
HVDKKGRVVK MERGRLTDDL VRGAYGGEVV RGDGYKVRLD QGNFVEELKL NEFGEVVARA
RAVKESYAVE VASKFFGIAG EDVRYKREGG AVKVDIFLNG HHHLAKVDEN GEVVDYVVVP
DAEIYEGFEK GYNIRMRALI VKTVEDGEEV VRVVTSEGVV DEKRAKRSLL RKIGSSLAGL
VKKSEEYSID TADPLNLI
|
|---|
| |